iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126754

Ensembl Protein ID

TRIUR3_20083-P1

UniProt Accession

M7ZBZ4; M7ZBZ4_TRIUA

Genbank Protein ID

EMS45609.1

Protein Name

Coatomer subunit alpha

Genbank Nucleotide ID

KD284699

Gene Name

TRIUR3_20083

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_20083	TRIUR3_20083-T1	TRIUR3_20083-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-39	131.8	50	86
UBD/Beta-Prp	1.20e-77	261.8	3	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW+++t+++l
   Q: 50   HDGPVRGVHFhaTQPLFVSGGDDYKIKVWNYKTHRCL 86
           99*********6449********************98 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           t +++++++++ + f+p +++++++  +g i+ wd+++g+ll ++ +h+++v+ v f+ +++++v+g++D+ ikvw+++t  c+ tl+gh d++
   Q: 3    TKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLTGHLDYI 96
           67889999************************************************************************************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......................... 166
           ++++f+ +  ++vs+s+d+tir+w++++++c+  +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+                         
   Q: 97   RTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVA-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIgalrkktvspaddilrltqmntdlf 189
           *********************************.*************************************************97777777777 PP
   S: 167  ..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
               + + + l+g h++ v++ sf+++ + +vsg++d++vklw +  ++   v+tl+gh +nv++v f+ +++++vs s+D+siriWd ++++ 
   Q: 190  ggVDAVVKYVLEG-HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAweVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTG 282
           6444444444466.********************************777668****************************************** PP
   S: 257  lktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           ++t+ +++++++  a+ +++ n l++g  ds   ++kl++++p
   Q: 283  IQTFRREHDRFWILAA-HPEMNLLAAG-HDSGMIVFKLERERP 323
           ****************.6666655555.689999999988765 PP

Organism

Triticum urartu

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.

Protein Sequence
(Fasta)

MLTKFETKSN RVKGLSFHPR RPWILASLHS GVIQMWDYRM GTLLDRFDEH DGPVRGVHFH 60
ATQPLFVSGG DDYKIKVWNY KTHRCLFTLT GHLDYIRTVQ FHHEYPWIVS ASDDQTIRIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGACCA AGTTCGAGAC CAAGAGCAAC CGGGTCAAGG GCCTGAGCTT CCACCCGCGG 60
CGGCCATGGA TCCTCGCCAG CCTCCACAGC GGCGTGATCC AGATGTGGGA CTACCGCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011048--Haem_d1
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	97.86	0.00e+00	2337.00
IUUC-Aml-001758	Ailuropoda melanoleuca	53.01	0.00e+00	1322.00
IUUC-Atr-002493	Amborella trichopoda	77.77	0.00e+00	1917.00
IUUC-Aca-005154	Anolis carolinensis	78.43	5.00e-96	342.00
IUUC-Aly-006020	Arabidopsis lyrata	75.76	0.00e+00	1891.00
IUUC-Ath-007058	Arabidopsis thaliana	76.07	0.00e+00	1890.00
IUUC-Ago-007992	Ashbya gossypii	43.52	0.00e+00	984.00
IUUC-Acl-008027	Aspergillus clavatus	47.18	0.00e+00	1110.00
IUUC-Afl-008644	Aspergillus flavus	48.05	0.00e+00	1123.00
IUUC-Afu-008964	Aspergillus fumigatus	48.21	0.00e+00	1128.00
IUUC-Ani-009379	Aspergillus nidulans	55.46	0.00e+00	978.00
IUUC-Ang-009756	Aspergillus niger	47.64	0.00e+00	1135.00
IUUC-Aor-010174	Aspergillus oryzae	48.05	0.00e+00	1125.00
IUUC-Ate-010302	Aspergillus terreus	48.70	0.00e+00	1166.00
IUUC-Bgr-012300	Blumeria graminis	46.85	0.00e+00	1075.00
IUUC-Bta-012524	Bos taurus	53.48	0.00e+00	1317.00
IUUC-Bci-013781	Botrytis cinerea	46.37	0.00e+00	1119.00
IUUC-Bol-015925	Brassica oleracea	82.65	0.00e+00	1465.00
IUUC-Bra-016978	Brassica rapa	75.18	0.00e+00	1877.00
IUUC-Cel-018115	Caenorhabditis elegans	55.05	0.00e+00	933.00
IUUC-Cja-019107	Callithrix jacchus	52.53	0.00e+00	1307.00
IUUC-Cfa-020675	Canis familiaris	52.65	0.00e+00	1294.00
IUUC-Cpo-021813	Cavia porcellus	53.56	0.00e+00	1330.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	69.35	0.00e+00	1241.00
IUUC-Csa-023523	Chlorocebus sabaeus	53.64	0.00e+00	1338.00
IUUC-Cin-025572	Ciona intestinalis	49.60	0.00e+00	1224.00
IUUC-Csv-025864	Ciona savignyi	56.31	0.00e+00	972.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	55.74	0.00e+00	986.00
IUUC-Cne-027053	Cryptococcus neoformans	50.53	0.00e+00	1165.00
IUUC-Dre-027421	Danio rerio	53.52	0.00e+00	1313.00
IUUC-Dno-029303	Dasypus novemcinctus	53.48	0.00e+00	1335.00
IUUC-Dor-030290	Dipodomys ordii	52.46	1.00e-164	573.00
IUUC-Dse-031543	Dothistroma septosporum	45.93	0.00e+00	1058.00
IUUC-Ete-032873	Echinops telfairi	51.80	0.00e+00	1172.00
IUUC-Eca-033773	Equus caballus	52.73	0.00e+00	1291.00
IUUC-Fca-035739	Felis catus	52.57	0.00e+00	1302.00
IUUC-Fal-037263	Ficedula albicollis	50.04	0.00e+00	1165.00
IUUC-Fox-037738	Fusarium oxysporum	47.95	0.00e+00	1124.00
IUUC-Fso-038153	Fusarium solani	46.82	0.00e+00	1120.00
IUUC-Gmo-039602	Gadus morhua	49.16	0.00e+00	1199.00
IUUC-Ggr-039931	Gaeumannomyces graminis	54.35	0.00e+00	967.00
IUUC-Gga-040590	Gallus gallus	53.80	0.00e+00	1324.00
IUUC-Gac-041318	Gasterosteus aculeatus	53.66	0.00e+00	1312.00
IUUC-Gma-043894	Glycine max	76.31	0.00e+00	1932.00
IUUC-Ggo-045029	Gorilla gorilla	53.17	0.00e+00	1328.00
IUUC-Hsa-046078	Homo sapiens	53.17	0.00e+00	1327.00
IUUC-Hvu-047316	Hordeum vulgare	97.04	0.00e+00	2258.00
IUUC-Kpa-049256	Komagataella pastoris	46.05	0.00e+00	1058.00
IUUC-Lch-049706	Latimeria chalumnae	53.55	0.00e+00	1315.00
IUUC-Lpe-051316	Leersia perrieri	92.28	0.00e+00	2236.00
IUUC-Loc-051867	Lepisosteus oculatus	41.38	0.00e+00	866.00
IUUC-Lma-053138	Leptosphaeria maculans	54.99	0.00e+00	998.00
IUUC-Laf-053510	Loxodonta africana	53.16	0.00e+00	1330.00
IUUC-Mcc-055836	Macaca mulatta	53.10	0.00e+00	1321.00
IUUC-Meu-056238	Macropus eugenii	56.07	0.00e+00	771.00
IUUC-Mor-057172	Magnaporthe oryzae	46.39	0.00e+00	1097.00
IUUC-Mpo-057300	Magnaporthe poae	46.88	0.00e+00	1093.00
IUUC-Mtr-058248	Medicago truncatula	76.23	0.00e+00	1928.00
IUUC-Mla-059019	Melampsora laricipopulina	49.20	0.00e+00	1191.00
IUUC-Mga-059499	Meleagris gallopavo	53.71	0.00e+00	1320.00
IUUC-Mmr-061102	Microcebus murinus	53.01	0.00e+00	1313.00
IUUC-Mdo-062594	Monodelphis domestica	53.80	0.00e+00	1351.00
IUUC-Mmu-063736	Mus musculus	52.93	0.00e+00	1318.00
IUUC-Mac-065272	Musa acuminata	72.23	0.00e+00	1800.00
IUUC-Mpu-066701	Mustela putorius furo	53.32	0.00e+00	1320.00
IUUC-Mlu-067392	Myotis lucifugus	53.28	0.00e+00	1318.00
IUUC-Nfi-068270	Neosartorya fischeri	55.41	0.00e+00	976.00
IUUC-Ncr-068892	Neurospora crassa	47.51	0.00e+00	1109.00
IUUC-Nle-069634	Nomascus leucogenys	65.12	0.00e+00	944.00
IUUC-Ont-072488	Oreochromis niloticus	53.12	0.00e+00	1297.00
IUUC-Ocu-074211	Oryctolagus cuniculus	53.48	0.00e+00	1327.00
IUUC-Oba-075761	Oryza barthii	91.37	0.00e+00	2253.00
IUUC-Obr-076429	Oryza brachyantha	90.48	0.00e+00	2242.00
IUUC-Ogl-077364	Oryza glaberrima	91.30	0.00e+00	2253.00
IUUC-Ogu-078257	Oryza glumaepatula	90.85	0.00e+00	2185.00
IUUC-Oin-079274	Oryza indica	91.13	0.00e+00	2250.00
IUUC-Olo-080466	Oryza longistaminata	96.21	0.00e+00	1657.00
IUUC-Ome-081668	Oryza meridionalis	86.75	0.00e+00	1941.00
IUUC-Oni-082874	Oryza nivara	91.13	0.00e+00	2249.00
IUUC-Opu-083885	Oryza punctata	91.63	0.00e+00	2264.00
IUUC-Oru-084274	Oryza rufipogon	91.22	0.00e+00	2251.00
IUUC-Osa-085565	Oryza sativa	91.22	0.00e+00	2251.00
IUUC-Ola-086921	Oryzias latipes	52.65	0.00e+00	1290.00
IUUC-Olu-087639	Ostreococcus lucimarinus	59.63	0.00e+00	1491.00
IUUC-Oga-087991	Otolemur garnettii	50.57	0.00e+00	1236.00
IUUC-Oar-089590	Ovis aries	53.24	0.00e+00	1331.00
IUUC-Ptr-090808	Pan troglodytes	53.25	0.00e+00	1330.00
IUUC-Pan-092475	Papio anubis	53.35	0.00e+00	1330.00
IUUC-Psi-093044	Pelodiscus sinensis	54.01	0.00e+00	894.00
IUUC-Pno-094839	Phaeosphaeria nodorum	46.29	0.00e+00	1050.00
IUUC-Ppa-095390	Physcomitrella patens	67.38	0.00e+00	1684.00
IUUC-Pfo-097493	Poecilia formosa	53.35	0.00e+00	1299.00
IUUC-Pab-098497	Pongo abelii	53.56	0.00e+00	1337.00
IUUC-Pop-100086	Populus trichocarpa	78.21	0.00e+00	1950.00
IUUC-Pca-100413	Procavia capensis	60.07	0.00e+00	691.00
IUUC-Ppe-101392	Prunus persica	78.26	0.00e+00	1979.00
IUUC-Pva-102126	Pteropus vampyrus	51.08	0.00e+00	1254.00
IUUC-Pgr-103376	Puccinia graminis	50.24	0.00e+00	1209.00
IUUC-Ptt-103978	Puccinia triticina	45.08	0.00e+00	969.00
IUUC-Pte-104126	Pyrenophora teres	54.70	0.00e+00	950.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	46.13	3.00e-179	621.00
IUUC-Rno-105428	Rattus norvegicus	53.24	0.00e+00	1325.00
IUUC-Sce-106464	Saccharomyces cerevisiae	42.48	0.00e+00	946.00
IUUC-Sha-107301	Sarcophilus harrisii	52.98	0.00e+00	1316.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	44.64	0.00e+00	1063.00
IUUC-Spo-108217	Schizosaccharomyces pombe	43.80	0.00e+00	1043.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	47.29	0.00e+00	1120.00
IUUC-Smo-109582	Selaginella moellendorffii	73.85	0.00e+00	1358.00
IUUC-Sit-109697	Setaria italica	89.99	0.00e+00	2230.00
IUUC-Sly-111759	Solanum lycopersicum	77.28	0.00e+00	1967.00
IUUC-Stu-112564	Solanum tuberosum	77.36	0.00e+00	1967.00
IUUC-Sbi-114388	Sorghum bicolor	90.48	0.00e+00	2234.00
IUUC-Sre-115209	Sporisorium reilianum	55.42	0.00e+00	1000.00
IUUC-Ssc-115933	Sus scrofa	53.48	0.00e+00	1331.00
IUUC-Tru-117772	Takifugu rubripes	53.33	0.00e+00	1279.00
IUUC-Tsy-119105	Tarsius syrichta	50.64	0.00e+00	998.00
IUUC-Tni-120556	Tetraodon nigroviridis	40.40	0.00e+00	849.00
IUUC-Tre-121951	Trichoderma reesei	46.87	0.00e+00	1085.00
IUUC-Tvi-122359	Trichoderma virens	46.95	0.00e+00	1111.00
IUUC-Tae-125527	Triticum aestivum	97.86	0.00e+00	2337.00
IUUC-Tme-127170	Tuber melanosporum	48.05	0.00e+00	1171.00
IUUC-Tbe-127882	Tupaia belangeri	68.71	3.00e-129	455.00
IUUC-Ttr-128217	Tursiops truncatus	51.08	0.00e+00	1254.00
IUUC-Uma-129337	Ustilago maydis	55.54	0.00e+00	999.00
IUUC-Vda-129828	Verticillium dahliae	46.73	0.00e+00	1111.00
IUUC-Vpa-130537	Vicugna pacos	52.80	0.00e+00	1307.00
IUUC-Vvi-130958	Vitis vinifera	78.51	0.00e+00	1964.00
IUUC-Xtr-132857	Xenopus tropicalis	51.67	0.00e+00	1241.00
IUUC-Xma-133138	Xiphophorus maculatus	53.35	0.00e+00	1301.00
IUUC-Yli-134399	Yarrowia lipolytica	48.90	0.00e+00	836.00
IUUC-Zma-135612	Zea mays	87.84	0.00e+00	2246.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence