iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098965

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_823107; POPTR_0011s15390g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s15390	POPTR_0011s15390.1	POPTR_0011s15390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.80e-06	27.9	109	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ +  +d+++ l  C Hvfh +Cl  w     + +++ +CP+Cr
   Q: 109  CPVCLDCIqeRDEVRELCnCSHVFHMKCLDSW-----VDQGQVTCPTCR 152
           ****997766444774434*************.....8**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGISFVAVKM PKCFGLQFLL EFLTFIKLLF LLTLSNLLMS RPLRQPYNTD QDQNPTEDYV 60
LVMGELSPSP IPVPVSVLTR LIKKKLPVMA FSSLLERLVK LEDDQESMCP VCLDCIQERD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTGCTTAA ATCGTAGTTT CCTATGATAT TTCTCTACCC ATTGAAGTGT TCCTCTCCAT 60
TATAAACCCT ACCTAGCCAG TCGCTTCCTC TTCTTCTTCA ACTTCAAGCC TCCCTTCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0011s15390g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000683	Aegilops tauschii	50.00	5.00e-14	68.20
IUUC-Atr-002993	Amborella trichopoda	40.00	4.00e-19	86.70
IUUC-Bdi-014912	Brachypodium distachyon	42.19	2.00e-08	51.60
IUUC-Hvu-047283	Hordeum vulgare	42.35	7.00e-18	82.80
IUUC-Mac-065298	Musa acuminata	45.10	2.00e-20	93.60
IUUC-Obr-076437	Oryza brachyantha	38.64	8.00e-16	75.90
IUUC-Opu-083540	Oryza punctata	38.10	3.00e-16	77.00
IUUC-Ppe-101959	Prunus persica	44.97	9.00e-33	132.00
IUUC-Pgr-103379	Puccinia graminis	46.81	3.00e-08	52.00
IUUC-Sit-110391	Setaria italica	57.78	2.00e-13	69.30
IUUC-Sly-110963	Solanum lycopersicum	37.04	3.00e-24	103.00
IUUC-Stu-112411	Solanum tuberosum	38.71	3.00e-22	96.70
IUUC-Sbi-114852	Sorghum bicolor	52.08	6.00e-13	66.60
IUUC-Tca-121111	Theobroma cacao	40.88	7.00e-29	119.00
IUUC-Tae-125907	Triticum aestivum	53.33	3.00e-16	77.40
IUUC-Tur-126344	Triticum urartu	57.14	2.00e-15	73.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence