iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2091__AT2G39940.1	fgenesh2_kg.4__2091__AT2G39940.1	fgenesh2_kg.4__2091__AT2G39940.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	97.64	0.00e+00	1147.00	IUUC-Ath-007180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEDPDIKKCR LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC 60
YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV TPWVTEISKS LKQLKSVHFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCCACTTTC TTCTTCCTCC TCCCAATCCG CCTCTTCTTC CTACGCGTGT CTCCTTCTCC 60
TTCACTCTCA ATCTCTTTGC TTCCTTCCTT CTTCATCTCC TCACTGTGTT TATGTGTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like

Gene Ontology

GO:0009901--P:anther dehiscence
GO:0042742--P:defense response to bacterium
GO:0050832--P:defense response to fungus
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0031348--P:negative regulation of defense response
GO:0009909--P:regulation of flower development
GO:0010218--P:response to far red light
GO:0009625--P:response to insect
GO:0009611--P:response to wounding
GO:0048364--P:root development
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0009641--P:shade avoidance
GO:0010118--P:stomatal movement

KEGG

aly:ARALYDRAFT_483031

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000796	Aegilops tauschii	58.02	0.00e+00	645.00
IUUC-Atr-002549	Amborella trichopoda	66.08	0.00e+00	770.00
IUUC-Ath-007180	Arabidopsis thaliana	97.64	0.00e+00	1160.00
IUUC-Bdi-014782	Brachypodium distachyon	59.02	0.00e+00	700.00
IUUC-Bol-015554	Brassica oleracea	90.00	0.00e+00	1069.00
IUUC-Bra-016888	Brassica rapa	90.34	0.00e+00	1073.00
IUUC-Gma-043551	Glycine max	70.41	0.00e+00	801.00
IUUC-Hvu-047266	Hordeum vulgare	57.67	0.00e+00	695.00
IUUC-Lpe-051259	Leersia perrieri	57.54	0.00e+00	694.00
IUUC-Mtr-058101	Medicago truncatula	70.07	0.00e+00	845.00
IUUC-Mla-058951	Melampsora laricipopulina	38.64	6.00e-03	34.70
IUUC-Mac-064569	Musa acuminata	64.10	0.00e+00	780.00
IUUC-Oba-075167	Oryza barthii	58.85	0.00e+00	690.00
IUUC-Obr-076639	Oryza brachyantha	57.71	0.00e+00	697.00
IUUC-Ogl-077001	Oryza glaberrima	58.85	0.00e+00	690.00
IUUC-Ogu-077962	Oryza glumaepatula	58.85	0.00e+00	690.00
IUUC-Oin-080055	Oryza indica	58.85	0.00e+00	690.00
IUUC-Olo-080585	Oryza longistaminata	57.22	0.00e+00	668.00
IUUC-Ome-081458	Oryza meridionalis	58.68	0.00e+00	689.00
IUUC-Oni-082828	Oryza nivara	58.85	0.00e+00	691.00
IUUC-Opu-083852	Oryza punctata	55.61	0.00e+00	686.00
IUUC-Oru-084264	Oryza rufipogon	58.85	0.00e+00	690.00
IUUC-Osa-085473	Oryza sativa	58.85	0.00e+00	690.00
IUUC-Ppa-095375	Physcomitrella patens	40.28	7.00e-127	446.00
IUUC-Pop-098824	Populus trichocarpa	70.34	0.00e+00	801.00
IUUC-Ppe-101270	Prunus persica	72.53	0.00e+00	847.00
IUUC-Smo-109025	Selaginella moellendorffii	41.54	9.00e-126	443.00
IUUC-Sit-110450	Setaria italica	57.57	0.00e+00	672.00
IUUC-Sly-111556	Solanum lycopersicum	68.59	0.00e+00	776.00
IUUC-Sbi-114639	Sorghum bicolor	57.99	0.00e+00	672.00
IUUC-Tca-121390	Theobroma cacao	72.70	0.00e+00	865.00
IUUC-Tae-124864	Triticum aestivum	56.85	0.00e+00	688.00
IUUC-Tur-126659	Triticum urartu	57.44	0.00e+00	650.00
IUUC-Vvi-131061	Vitis vinifera	71.80	0.00e+00	825.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence