iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014464

UUCD1 version

UUC-BrD-01318

Ensembl Protein ID

BRADI4G28467.1

UniProt Accession

I1IPI1; I1IPI1_BRADI

Genbank Protein ID

KQJ89921.1; KQJ89922.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883; CM000883

Gene Name

LOC100829744; BRADI_4g28467

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G28467	BRADI4G28467.1	BRADI4G28467.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-24	84.2	282	312
E3 adaptor/Cullin RING/APC_C/CDC20	6.90e-118	393.9	147	457

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v++l++  s+  l+sG++D+ +++WD
   Q: 282  GHAAEVCGLRWsgSCQQLASGGNDNLVHIWD 312
           8**********966599************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltg. 94
           e+ ldap + dd+ylnLldW+sknvl++aL++++ylw+ ++++ s+l  + +++  +tsvsw  +g+++avG +++ ++++D+++++ +r+l+g 
   Q: 147  ERTLDAPGVVDDYYLNLLDWGSKNVLSIALENTLYLWNSADSSTSELVTIdNDHGPITSVSWACDGQHIAVGLNSSDIQLWDTSSNRLMRKLQGv 241
           689**********************************************9777889************************************654 PP
   S: 95   hsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.........Plkkfkehka 180
           h++rv++L+Wn+ +l++G+ dg+i+ +dvr++ + ++t+++ha evCGl+w+ + ++LasGGnDn v++wdas  +          l++f++h a
   Q: 242  HQSRVASLAWNNSILTTGGMDGKIVNNDVRMRSHIVQTYRGHAAEVCGLRWSGSCQQLASGGNDNLVHIWDASMASsnpslgysrWLHRFSDHLA 336
           99*********************************************************************98776676777766789******* PP
   S: 181  avkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslal 275
           avka+aw+P+q++lLasGGG +Drcikfwnt tg +l+++dtg+qvc llw k++kel+s+ Gf +n +tlwkyps+ k+ael+gh++Rvl+la 
   Q: 337  AVKALAWCPFQSNLLASGGGGNDRCIKFWNTHTGLCLNSVDTGGQVCALLWNKNEKELLSACGFVQNPLTLWKYPSMVKLAELNGHTSRVLCLAQ 431
           *********************************************************************************************** PP
   S: 276  spdgeaivtaagDetlrfwklfdkkk 301
           spdg++++++a+Detlrfw++f + +
   Q: 432  SPDGSTVASVAADETLRFWNVFGTPQ 457
           **********************8765 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MEAAGSGSAA STPKRRRLEL RPLVPLEVAG ARRPYMPSLC SNSNNPSAKY YGDRFIPDRS 60
AMDMDMAYYL LTEPKKDQEN EVKVSPAKEA YRRLLAEKIL SSRTRILAFR NKPPEHEGML 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCGG CGGGCTCCGG TTCGGCGGCC TCGACGCCGA AACGCCGCCG GCTCGAGCTG 60
CGGCCGCTGG TGCCACTGGA GGTGGCCGGC GCGAGGAGAC CGTACATGCC GTCCCTCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

bdi:100829744

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000267	Aegilops tauschii	89.21	0.00e+00	777.00
IUUC-Hvu-047645	Hordeum vulgare	88.52	0.00e+00	841.00
IUUC-Oin-080069	Oryza indica	78.03	0.00e+00	759.00
IUUC-Opu-083543	Oryza punctata	77.42	0.00e+00	748.00
IUUC-Osa-085604	Oryza sativa	78.45	0.00e+00	762.00
IUUC-Tae-123563	Triticum aestivum	88.77	0.00e+00	843.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence