iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028686

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme E2D 4 (putative); Zgc:162263 protein

Genbank Nucleotide ID

CU570784

Gene Name

ube2d4; zgc:162263

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000015057.7	ENSDART00000098439.4	ENSDARP00000089210.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.60e-57	192.3	5	139
UBD/UBC-like/UBD_UBC	2.70e-83	277.9	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkee 89
           R++kel++l++dpp+++sa+pv e dl++w+++i+Gp+d+pY+ggvF l+i+fp+dYPfkPPkv f+tki+hPn+++nG++Cl+il+  
   Q: 5    RIQKELTDLQRDPPAQCSAGPVGE-DLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR-- 90
           9***********************.9************************************************************9.. PP
   S: 90   ekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           ++Wspal+v++vllsi+sll++pnp++pl  e+a+++k++re+y++ +r
   Q: 91   SQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAR 139
           *********************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqw 89
           ri+kel dl+rd++aq+sa++v++dlf+++ati+gp+dspy+ggvfflti++ptdypfkppkvaf+tkiyhpninsngsicldilrsqw
   Q: 5    RIQKELTDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQW 93
           8**************************************************************************************** PP
   S: 90   saaltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           s+alt+skvlls+csll+d++pddplv+eia+ yk+d+eky+r arewt
   Q: 94   SPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWT 142
           ************************************************8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MALKRIQKEL TDLQRDPPAQ CSAGPVGEDL FHWQATIMGP NDSPYQGGVF FLTIHFPTDY 60
PFKPPKVAFT TKIYHPNINS NGSICLDILR SQWSPALTVS KVLLSICSLL CDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCACAGCAC TAAAAACTGT CAGTGAGGCT AGTGGGGGGT AAGAATTGAC CAAATCTGCG 60
ACTGTCCTGT CAAACAGCGG TGTGAATGTC CACATCTGTG CTCCTGTGTT GTTATATACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

dre:100001914

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000292	Aegilops tauschii	80.27	2.00e-70	257.00
IUUC-Atr-002861	Amborella trichopoda	81.63	3.00e-71	260.00
IUUC-Aly-006364	Arabidopsis lyrata	80.95	2.00e-71	260.00
IUUC-Afl-008709	Aspergillus flavus	80.28	9.00e-70	258.00
IUUC-Ani-009401	Aspergillus nidulans	84.35	1.00e-73	268.00
IUUC-Bdi-014561	Brachypodium distachyon	81.63	3.00e-72	263.00
IUUC-Bol-015722	Brassica oleracea	81.63	9.00e-72	262.00
IUUC-Cja-019014	Callithrix jacchus	96.48	3.00e-81	293.00
IUUC-Cpo-021897	Cavia porcellus	97.20	6.00e-82	295.00
IUUC-Csa-023377	Chlorocebus sabaeus	96.50	3.00e-81	293.00
IUUC-Dor-030323	Dipodomys ordii	98.64	3.00e-85	306.00
IUUC-Eca-033231	Equus caballus	99.28	6.00e-81	292.00
IUUC-Gma-044172	Glycine max	81.63	6.00e-71	259.00
IUUC-Ggo-045361	Gorilla gorilla	99.32	1.00e-85	308.00
IUUC-Hsa-045934	Homo sapiens	99.32	1.00e-85	308.00
IUUC-Hvu-047546	Hordeum vulgare	78.91	6.00e-70	255.00
IUUC-Lpe-051289	Leersia perrieri	82.31	1.00e-71	261.00
IUUC-Loc-052838	Lepisosteus oculatus	99.32	1.00e-85	308.00
IUUC-Mcc-055421	Macaca mulatta	99.32	1.00e-85	308.00
IUUC-Mtr-058257	Medicago truncatula	80.95	9.00e-71	258.00
IUUC-Mac-064668	Musa acuminata	80.95	8.00e-71	259.00
IUUC-Nle-069715	Nomascus leucogenys	99.32	1.00e-85	308.00
IUUC-Ont-072562	Oreochromis niloticus	97.28	2.00e-84	303.00
IUUC-Oan-073026	Ornithorhynchus anatinus	98.57	5.00e-81	293.00
IUUC-Oba-075411	Oryza barthii	82.31	2.00e-71	260.00
IUUC-Obr-076658	Oryza brachyantha	80.95	3.00e-71	260.00
IUUC-Ogl-076968	Oryza glaberrima	82.31	2.00e-72	263.00
IUUC-Ogu-078091	Oryza glumaepatula	81.38	4.00e-71	262.00
IUUC-Oin-079659	Oryza indica	82.31	2.00e-72	263.00
IUUC-Olo-080786	Oryza longistaminata	82.31	2.00e-71	260.00
IUUC-Ome-081987	Oryza meridionalis	80.27	1.00e-70	258.00
IUUC-Oni-082391	Oryza nivara	82.31	2.00e-72	266.00
IUUC-Opu-083833	Oryza punctata	80.95	3.00e-71	259.00
IUUC-Oru-085167	Oryza rufipogon	82.31	2.00e-72	265.00
IUUC-Osa-086003	Oryza sativa	82.31	2.00e-72	263.00
IUUC-Ola-087515	Oryzias latipes	96.60	9.00e-84	301.00
IUUC-Pan-092614	Papio anubis	96.55	4.00e-82	296.00
IUUC-Ppa-095442	Physcomitrella patens	81.63	3.00e-71	260.00
IUUC-Pfo-096867	Poecilia formosa	96.60	9.00e-84	301.00
IUUC-Pab-098760	Pongo abelii	98.64	5.00e-85	306.00
IUUC-Pop-099853	Populus trichocarpa	81.63	3.00e-71	260.00
IUUC-Ppe-101387	Prunus persica	81.63	6.00e-71	259.00
IUUC-Smo-108911	Selaginella moellendorffii	81.63	1.00e-70	258.00
IUUC-Sit-109936	Setaria italica	82.31	3.00e-72	264.00
IUUC-Sly-110857	Solanum lycopersicum	81.63	8.00e-72	262.00
IUUC-Stu-112436	Solanum tuberosum	82.31	1.00e-72	265.00
IUUC-Sbi-114840	Sorghum bicolor	82.31	2.00e-72	264.00
IUUC-Ssc-115391	Sus scrofa	99.32	1.00e-85	308.00
IUUC-Tsy-118832	Tarsius syrichta	96.60	1.00e-82	298.00
IUUC-Tca-121542	Theobroma cacao	80.95	5.00e-72	263.00
IUUC-Tae-123340	Triticum aestivum	82.99	2.00e-73	267.00
IUUC-Tur-126518	Triticum urartu	80.27	8.00e-71	259.00
IUUC-Tbe-128122	Tupaia belangeri	95.97	1.00e-60	224.00
IUUC-Vvi-131368	Vitis vinifera	80.95	3.00e-71	260.00
IUUC-Xtr-132238	Xenopus tropicalis	98.64	3.00e-85	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence