iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113792

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G337000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g038120	Sb03g038120.1	Sb03g038120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.20e-56	190.3	5	139
UBD/UBC-like/UBD_UBC	8.00e-74	247.1	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           R+ kelk+l+kdpp+++sa+p  e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv+f tk+fhPn+++nG++Cl+ilk  e+Wspal
   Q: 5    RILKELKDLQKDPPTSCSAGPAGE-DMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILK--EQWSPAL 97
           899*********************.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           ++++vllsi+sll++pnp++pl  e+a+++k++r +y+ ++r
   Q: 98   TISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYEATAR 139
           **************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltls 96
           ri kelkdl++d+++ +sa++ ++d+f+++ati+gppdspy ggvf ++i++p dypfkppkv+f tk++hpninsngsicldil++qws+alt+s
   Q: 5    RILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTIS 100
           899********************************************************************************************* PP
   S: 97   kvllslcslladaepddplvaeiariyktdkekykriarewt 138
           kvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 101  KVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYEATARSWT 142
           *****************************************8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPAGEDM FHWQATIMGP PDSPYAGGVF LVNIHFPPDY 60
PFKPPKVSFK TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAGATGGTA TTCCGGAATT ACCCCCGGGC CACCTTGCAC AGCTATCGGT TCACGACGCA 60
CCAACCGAGG CCAAAGGCCA CCACCATTCC TTCCCCAACT CCGCAGGCTG CTCATCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

sbi:SORBI_03g038120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007967	Ashbya gossypii	80.27	2.00e-71	260.00
IUUC-Ani-009401	Aspergillus nidulans	82.31	4.00e-73	265.00
IUUC-Ang-009725	Aspergillus niger	82.40	2.00e-63	233.00
IUUC-Ate-010438	Aspergillus terreus	80.95	4.00e-72	262.00
IUUC-Cme-027220	Cyanidioschyzon merolae	80.95	5.00e-71	258.00
IUUC-Fox-038021	Fusarium oxysporum	81.63	9.00e-73	264.00
IUUC-Kpa-049290	Komagataella pastoris	78.91	3.00e-70	256.00
IUUC-Lpe-050989	Leersia perrieri	99.32	8.00e-86	308.00
IUUC-Oba-075924	Oryza barthii	99.32	2.00e-85	306.00
IUUC-Obr-076481	Oryza brachyantha	99.32	3.00e-85	306.00
IUUC-Ogl-077951	Oryza glaberrima	98.66	5.00e-84	301.00
IUUC-Ogu-078581	Oryza glumaepatula	99.32	2.00e-85	306.00
IUUC-Oin-080173	Oryza indica	99.32	3.00e-85	306.00
IUUC-Ome-081967	Oryza meridionalis	99.32	3.00e-85	306.00
IUUC-Oni-082445	Oryza nivara	99.32	2.00e-85	306.00
IUUC-Opu-083205	Oryza punctata	99.32	5.00e-85	306.00
IUUC-Osa-085585	Oryza sativa	99.32	1.00e-85	307.00
IUUC-Ppa-095177	Physcomitrella patens	95.95	6.00e-83	298.00
IUUC-Pgr-103381	Puccinia graminis	81.63	5.00e-69	253.00
IUUC-Ptt-103723	Puccinia triticina	78.57	2.00e-62	230.00
IUUC-Sce-106463	Saccharomyces cerevisiae	80.82	3.00e-72	263.00
IUUC-Tre-122125	Trichoderma reesei	81.63	5.00e-72	261.00
IUUC-Tvi-122296	Trichoderma virens	81.63	5.00e-72	261.00
IUUC-Tur-126518	Triticum urartu	97.97	1.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence