iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080423

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538890.1_FG034	KN538890.1_FGT034	KN538890.1_FGP034

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.1	236	278

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e +     d + vlpCgH++h +Cl  +     ++  +f CPlC
   Q: 236  CPICFEYLfestND-VSVLPCGHTIHVKCLREM-----EEHCQFACPLC 278
           ******99666444.999************777.....688999***** PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MDVQLESTAV QHGQAKLNVE EHALVSLLSD EKYAAEKTED VDPDDYEKLE EGIMQYGCAH 60
YRRRCRIRAP CCNEIFDCRH CHNETKNSIK IDAVKRHELP RHEVQQVICS LCGTEQEVRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGTAC AACTTGAGTC TACTGCTGTT CAACATGGAC AGGCTAAGCT AAATGTGGAG 60
GAACATGCTC TAGTTTCTCT GTTGTCTGAT GAGAAGTACG CAGCTGAAAA GACCGAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000273	Aegilops tauschii	46.18	2.00e-67	248.00
IUUC-Aly-005866	Arabidopsis lyrata	55.76	3.00e-80	290.00
IUUC-Ath-006644	Arabidopsis thaliana	55.94	2.00e-77	281.00
IUUC-Bdi-014740	Brachypodium distachyon	65.92	1.00e-108	385.00
IUUC-Hvu-047668	Hordeum vulgare	64.63	4.00e-107	379.00
IUUC-Mac-064690	Musa acuminata	57.81	4.00e-75	273.00
IUUC-Oba-075768	Oryza barthii	80.83	2.00e-141	494.00
IUUC-Obr-076899	Oryza brachyantha	73.80	2.00e-125	440.00
IUUC-Ogu-078233	Oryza glumaepatula	80.83	7.00e-141	493.00
IUUC-Oin-079289	Oryza indica	78.37	5.00e-136	476.00
IUUC-Ome-081323	Oryza meridionalis	81.15	4.00e-142	496.00
IUUC-Oni-082322	Oryza nivara	80.51	3.00e-140	490.00
IUUC-Opu-083185	Oryza punctata	77.64	5.00e-133	466.00
IUUC-Oru-085111	Oryza rufipogon	79.00	5.00e-139	486.00
IUUC-Osa-085701	Oryza sativa	80.83	1.00e-141	494.00
IUUC-Sit-110262	Setaria italica	69.65	2.00e-118	417.00
IUUC-Stu-112734	Solanum tuberosum	52.61	4.00e-85	306.00
IUUC-Sbi-113837	Sorghum bicolor	68.37	2.00e-118	417.00
IUUC-Tae-125454	Triticum aestivum	63.17	4.00e-107	380.00
IUUC-Tur-126465	Triticum urartu	65.92	1.00e-111	394.00
IUUC-Vvi-131084	Vitis vinifera	60.00	2.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence