iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d043613	Zm00001d043613_T001	Zm00001d043613_T001
Zm00001d043613	Zm00001d043613_T013	Zm00001d043613_T013
Zm00001d043613	Zm00001d043613_T009	Zm00001d043613_T009
Zm00001d043613	Zm00001d043613_T007	Zm00001d043613_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-06	30.0	195	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.................kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iC+e                    d + vlpCgH++h +Cl+ +     ++  +f CPlC
   Q: 195  CPICFEFSyfptdlfrefqylfdstND-VSVLPCGHTIHVKCLKEM-----EEHCQFACPLC 250
           ****88555777777777777666455.999************888.....689999***** PP

Organism

Zea mays

Protein Sequence
(Fasta)

MGALDLHLDF ASAQHGQAKL KEYAKSSLLS DGNYNTDKIN GSNPDDYEKF EKGIMHYGCP 60
HYRRRCRIRA PCCNEIFDCR HCHNETKNSI KIDKMKRHEL PRHEVQQVVC SLCGTEQEVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCACGTCA GCCGCCCGAA TCCTCCAGAA ACCGTGTGCT CCCCGAAGCA GTTTAGATAT 60
CTTCCTCCCA ACCTTCCCTG CCAAATCGCG GTCACTGCTC CGAAGTCCGA ACCTTCATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000273	Aegilops tauschii	58.48	3.00e-98	350.00
IUUC-Atr-003010	Amborella trichopoda	70.63	9.00e-114	402.00
IUUC-Aly-005866	Arabidopsis lyrata	70.08	5.00e-103	366.00
IUUC-Ath-006644	Arabidopsis thaliana	66.30	2.00e-100	358.00
IUUC-Bdi-014740	Brachypodium distachyon	78.66	8.00e-135	472.00
IUUC-Bol-016218	Brassica oleracea	69.06	5.00e-109	386.00
IUUC-Bra-017289	Brassica rapa	67.92	2.00e-106	378.00
IUUC-Gma-043434	Glycine max	72.83	4.00e-113	400.00
IUUC-Hvu-047668	Hordeum vulgare	77.14	4.00e-131	459.00
IUUC-Mtr-058223	Medicago truncatula	64.91	2.00e-103	368.00
IUUC-Mac-064690	Musa acuminata	70.48	4.00e-100	357.00
IUUC-Oba-075768	Oryza barthii	81.59	4.00e-152	530.00
IUUC-Obr-076899	Oryza brachyantha	80.00	2.00e-139	487.00
IUUC-Ogu-078233	Oryza glumaepatula	81.59	2.00e-151	528.00
IUUC-Oin-079289	Oryza indica	78.93	6.00e-145	506.00
IUUC-Olo-080423	Oryza longistaminata	65.95	3.00e-116	411.00
IUUC-Ome-081323	Oryza meridionalis	81.90	7.00e-153	532.00
IUUC-Oni-082322	Oryza nivara	81.27	4.00e-151	527.00
IUUC-Opu-083185	Oryza punctata	81.59	3.00e-143	500.00
IUUC-Oru-085111	Oryza rufipogon	79.75	9.00e-150	522.00
IUUC-Osa-085701	Oryza sativa	81.59	3.00e-152	530.00
IUUC-Pop-099379	Populus trichocarpa	68.07	4.00e-113	400.00
IUUC-Sit-110262	Setaria italica	87.94	4.00e-153	533.00
IUUC-Sly-111522	Solanum lycopersicum	60.52	1.00e-108	385.00
IUUC-Stu-112734	Solanum tuberosum	69.29	4.00e-110	390.00
IUUC-Sbi-113837	Sorghum bicolor	91.75	1.00e-161	561.00
IUUC-Tca-121091	Theobroma cacao	62.62	5.00e-104	370.00
IUUC-Tae-125454	Triticum aestivum	81.75	2.00e-137	481.00
IUUC-Tur-126465	Triticum urartu	77.14	1.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence