iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076015

Ensembl Protein ID

OB04G24180.1

UniProt Accession

J3LZ43; J3LZ43_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB04G24180	OB04G24180.1	OB04G24180.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.40e-30	103.7	279	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM dPv+++sG+ty+r++I kw++sg++tcP+tr +l++ +++Pn+ ++ li +wce+n++
   Q: 279  PPEELRCPISLQLMYDPVIVASGQTYERACIDKWFSSGNTTCPKTRNELSQLSMTPNYCIKGLIASWCEQNGV 351
           59********************************************************************985 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDKVEVDGNF IASGNWKLHG ALCKQLHKIV LEVLDAIPVL EATRPRNSSG LLALSSLRIA 60
VEKAKNLLQY CSECSKFYLA LTTENVITKF EKARYALLES LHQLEETLPE ATSSQIQGIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATAAAG TCGAGGTCGA TGGGAACTTC ATTGCTTCTG GTAATTGGAA GGTAATTCAC 60
CTGACCTCGT TGCACTGAAA GCTAATTGTT CTGCAATGTT AATATGATTA ATTGCTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000137	Aegilops tauschii	69.89	0.00e+00	894.00
IUUC-Bdi-014255	Brachypodium distachyon	71.45	0.00e+00	907.00
IUUC-Hvu-047784	Hordeum vulgare	69.70	0.00e+00	886.00
IUUC-Lpe-051367	Leersia perrieri	82.76	0.00e+00	1220.00
IUUC-Oba-075113	Oryza barthii	84.88	0.00e+00	1214.00
IUUC-Ogl-077487	Oryza glaberrima	85.01	0.00e+00	1217.00
IUUC-Ogu-078548	Oryza glumaepatula	85.15	0.00e+00	1218.00
IUUC-Oin-079540	Oryza indica	85.15	0.00e+00	1218.00
IUUC-Olo-080654	Oryza longistaminata	84.25	0.00e+00	1202.00
IUUC-Ome-081838	Oryza meridionalis	82.41	0.00e+00	1252.00
IUUC-Oni-082806	Oryza nivara	85.01	0.00e+00	1217.00
IUUC-Opu-083802	Oryza punctata	86.06	0.00e+00	1224.00
IUUC-Oru-084879	Oryza rufipogon	85.15	0.00e+00	1218.00
IUUC-Osa-085564	Oryza sativa	85.15	0.00e+00	1218.00
IUUC-Sit-110478	Setaria italica	65.55	0.00e+00	926.00
IUUC-Sbi-114006	Sorghum bicolor	63.17	0.00e+00	831.00
IUUC-Tae-123859	Triticum aestivum	70.50	0.00e+00	894.00
IUUC-Tur-126528	Triticum urartu	69.66	0.00e+00	863.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence