iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058168

Ensembl Protein ID

AES61437

UniProt Accession

Q2HW32; A0A0C3UQP9; G7I9E6; Q2HW32_MEDTR

Genbank Protein ID

ABD28351.1; AES61437.2

Protein Name

Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like; Topless-like protein

Genbank Nucleotide ID

AC147963; CM001217

Gene Name

MTR_1g083700; MtrDRAFT_AC147963g18v2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g083700	AES61437	AES61437

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-26	90.7	451	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWD 29
           H ++v++l+f  ++  l +v+++dD+ ikvWD
   Q: 451  HVGGVNDLSFalPNkQLcIVTCGDDKLIKVWD 482
           999*********7753359************* PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTSLSRELVF LILQFLDEEK FKESVHKLEK ESGFFFNMKY FEEKVQAGEW EEVEKYLAGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDRQDK PKAVEILVGD LKVFSTFNEE LYKEITQLLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAGTTTCGA ATCCGCAACA TAACTCTACT TCACTTATCA CTCGTACAAA CCGATAAGAT 60
ATACCACTTA TCGTATAACT CAACGTACTT ATATCTGATA GTTAAGTAGA AAAAGCAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR011048--Haem_d1
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

mtr:MTR_1g083700

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007641	Arabidopsis thaliana	74.29	0.00e+00	1729.00
IUUC-Bdi-014677	Brachypodium distachyon	71.95	0.00e+00	1643.00
IUUC-Bol-016367	Brassica oleracea	74.03	0.00e+00	1711.00
IUUC-Bra-017100	Brassica rapa	72.06	0.00e+00	1683.00
IUUC-Gma-042940	Glycine max	89.73	0.00e+00	2091.00
IUUC-Hvu-047370	Hordeum vulgare	71.60	0.00e+00	1667.00
IUUC-Lpe-050951	Leersia perrieri	72.00	0.00e+00	1613.00
IUUC-Mac-064999	Musa acuminata	70.18	0.00e+00	1686.00
IUUC-Oba-075415	Oryza barthii	73.18	0.00e+00	1690.00
IUUC-Obr-076726	Oryza brachyantha	73.36	0.00e+00	1706.00
IUUC-Ogl-077810	Oryza glaberrima	73.18	0.00e+00	1690.00
IUUC-Ogu-078090	Oryza glumaepatula	73.18	0.00e+00	1690.00
IUUC-Oin-080158	Oryza indica	72.98	0.00e+00	1683.00
IUUC-Olo-080271	Oryza longistaminata	71.95	0.00e+00	1647.00
IUUC-Ome-081965	Oryza meridionalis	73.44	0.00e+00	1680.00
IUUC-Oni-082421	Oryza nivara	73.27	0.00e+00	1691.00
IUUC-Opu-083912	Oryza punctata	73.09	0.00e+00	1690.00
IUUC-Oru-085201	Oryza rufipogon	73.18	0.00e+00	1690.00
IUUC-Osa-086161	Oryza sativa	73.18	0.00e+00	1690.00
IUUC-Pop-099268	Populus trichocarpa	82.49	0.00e+00	1847.00
IUUC-Ppe-102061	Prunus persica	82.60	0.00e+00	1888.00
IUUC-Sit-110487	Setaria italica	73.12	0.00e+00	1654.00
IUUC-Sbi-113873	Sorghum bicolor	72.42	0.00e+00	1672.00
IUUC-Tca-121768	Theobroma cacao	83.57	0.00e+00	1933.00
IUUC-Tae-125707	Triticum aestivum	71.49	0.00e+00	1647.00
IUUC-Tur-126477	Triticum urartu	67.72	0.00e+00	1617.00
IUUC-Vvi-131297	Vitis vinifera	82.24	0.00e+00	1900.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence