iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099542

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_561983; POPTR_0006s27930g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s27930	POPTR_0006s27930.1	POPTR_0006s27930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-41	137.4	506	544
UBD/Beta-Prp	3.20e-67	227.9	349	666

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++  +++++++Gs D+t+++WD+ +g +++
   Q: 506  GHLSDVDCVQWhaNCNYIATGSSDKTVRLWDVQSGECVR 544
           8***********766*********************986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........................lrsl.sgheaevtavkfspdgk 65
           +++++h+   ++c  +s d+sl+a g+ d+++kvwd+ +                                +l +gh+++v + +fsp g+
   Q: 349  TFINTHNG--LNCSSISHDGSLVAGGFSDSSLKVWDMAKLGQqagnsilqgendaapsehvlgpnsgkrSYTLfQGHSGPVHSATFSPLGD 437
           55666666..55566777*******************9944499***********************9966666***************** PP
   S: 66   ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGs 156
           +++++s D t+++w+ + +  ++ +kgh++ v++++fsp g++++s+shdrt+r+w ++  q l+ + +gh + v cv++h ++n++++Gs
   Q: 438  FILSSSADTTVRLWSTELNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDRIQPLR-IMAGHLSDVDCVQWHANCNYIATGS 527
           *****************************************************************.************************* PP
   S: 157  lDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsir 247
            D+tvrlWd+++g+++r + g h +++ sl+++++g++++sg++dg++ +wdl++g+c+  + gh + v+s++fs ++ +l+sgs+D +++
   Q: 528  SDKTVRLWDVQSGECVRIFIG-HRSMILSLAMSPDGRYMASGDEDGSIMMWDLSSGRCISPMMGHHSCVWSLAFSCESSLLASGSADCTVK 617
           ********************9.********************************************************************* PP
   S: 248  iWdlrsgdllktlqlhn..............ssvisvavlsfgdnvlvl 282
           +Wd+++++   +++ ++              +++++v++l+f++++l+ 
   Q: 618  LWDVTTSTKPAKTEESKsgnthrlrflktlpTKSTPVSTLRFSRRNLLF 666
           ****999988888888889999********************9887764 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDEEAVVKFV ETYLKKKGFK QAELAFQEEI QQQQQKQNNS KNAINIHSDP DLSTLLHSLS 60
QPEDSPARYQ EEYSKLRTWA YSSLDLYKHE LLRVLYPVFV HCYMDIVAKG HIQDARNFFN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCTTACTTG AAGAAGAAGA AGAGGGGCAA TTATGGATGA AGAAGCTGTG GTGAAGTTTG 60
TGGAGACGTA TTTGAAGAAG AAAGGGTTCA AGCAAGCAGA GCTTGCTTTC CAAGAAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0006s27930g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001607	Ailuropoda melanoleuca	36.77	2.00e-117	416.00
IUUC-Atr-003136	Amborella trichopoda	71.03	0.00e+00	963.00
IUUC-Apl-004193	Anas platyrhynchos	36.55	3.00e-114	405.00
IUUC-Aca-004522	Anolis carolinensis	36.84	8.00e-118	417.00
IUUC-Aly-006476	Arabidopsis lyrata	75.19	0.00e+00	1000.00
IUUC-Ath-006587	Arabidopsis thaliana	75.48	0.00e+00	1000.00
IUUC-Ago-007736	Ashbya gossypii	34.22	1.00e-106	380.00
IUUC-Acl-008092	Aspergillus clavatus	30.63	4.00e-88	318.00
IUUC-Afl-008659	Aspergillus flavus	30.48	4.00e-88	318.00
IUUC-Afu-008902	Aspergillus fumigatus	37.74	3.00e-73	269.00
IUUC-Ani-009462	Aspergillus nidulans	30.27	9.00e-74	270.00
IUUC-Aor-010083	Aspergillus oryzae	30.48	5.00e-88	318.00
IUUC-Ate-010271	Aspergillus terreus	30.39	5.00e-86	311.00
IUUC-Ame-010721	Astyanax mexicanus	43.31	8.00e-94	337.00
IUUC-Bgr-012257	Blumeria graminis	30.58	1.00e-79	290.00
IUUC-Bta-013539	Bos taurus	37.00	5.00e-118	417.00
IUUC-Bci-013737	Botrytis cinerea	27.91	2.00e-78	286.00
IUUC-Bol-015483	Brassica oleracea	73.85	0.00e+00	985.00
IUUC-Bra-017147	Brassica rapa	74.29	0.00e+00	988.00
IUUC-Cja-018881	Callithrix jacchus	36.69	2.00e-116	413.00
IUUC-Cfa-020056	Canis familiaris	36.84	4.00e-117	415.00
IUUC-Cpo-021454	Cavia porcellus	37.00	8.00e-120	424.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	41.34	1.00e-62	233.00
IUUC-Csa-023045	Chlorocebus sabaeus	37.10	4.00e-113	401.00
IUUC-Cho-024284	Choloepus hoffmanni	48.40	2.00e-77	283.00
IUUC-Cin-025457	Ciona intestinalis	51.12	2.00e-73	268.00
IUUC-Csv-025882	Ciona savignyi	41.48	1.00e-77	283.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.44	8.00e-74	271.00
IUUC-Cne-026876	Cryptococcus neoformans	32.31	9.00e-79	287.00
IUUC-Dre-027980	Danio rerio	44.42	3.00e-95	342.00
IUUC-Dno-028863	Dasypus novemcinctus	36.84	5.00e-117	414.00
IUUC-Dor-030561	Dipodomys ordii	37.09	3.00e-116	412.00
IUUC-Dse-031547	Dothistroma septosporum	37.71	1.00e-71	264.00
IUUC-Dme-031917	Drosophila melanogaster	41.33	9.00e-79	287.00
IUUC-Eca-033927	Equus caballus	37.44	5.00e-119	421.00
IUUC-Eeu-034449	Erinaceus europaeus	45.03	2.00e-88	319.00
IUUC-Fca-036325	Felis catus	36.84	5.00e-117	414.00
IUUC-Fal-036604	Ficedula albicollis	37.29	9.00e-114	404.00
IUUC-Fox-038049	Fusarium oxysporum	30.22	1.00e-48	187.00
IUUC-Fso-038302	Fusarium solani	34.94	3.00e-52	199.00
IUUC-Gmo-038832	Gadus morhua	42.89	8.00e-91	327.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.85	1.00e-71	263.00
IUUC-Gga-041147	Gallus gallus	37.72	2.00e-117	416.00
IUUC-Gac-041373	Gasterosteus aculeatus	43.57	2.00e-92	333.00
IUUC-Gma-043230	Glycine max	77.00	0.00e+00	1018.00
IUUC-Hsa-045971	Homo sapiens	36.74	1.00e-116	413.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	36.59	3.00e-116	412.00
IUUC-Lch-049526	Latimeria chalumnae	41.21	5.00e-85	308.00
IUUC-Loc-052882	Lepisosteus oculatus	44.36	1.00e-93	337.00
IUUC-Lma-053212	Leptosphaeria maculans	31.64	2.00e-74	273.00
IUUC-Laf-053859	Loxodonta africana	37.00	2.00e-117	416.00
IUUC-Mcc-054957	Macaca mulatta	37.64	4.00e-96	344.00
IUUC-Mor-057024	Magnaporthe oryzae	36.99	3.00e-52	199.00
IUUC-Mpo-057520	Magnaporthe poae	30.63	5.00e-70	258.00
IUUC-Mla-058881	Melampsora laricipopulina	40.48	1.00e-74	274.00
IUUC-Mga-059776	Meleagris gallopavo	37.31	6.00e-118	417.00
IUUC-Mmr-061783	Microcebus murinus	37.64	4.00e-96	344.00
IUUC-Mdo-062856	Monodelphis domestica	36.84	1.00e-116	413.00
IUUC-Mmu-064218	Mus musculus	36.69	2.00e-116	413.00
IUUC-Mac-064886	Musa acuminata	84.59	1.00e-132	466.00
IUUC-Mpu-065735	Mustela putorius furo	36.84	5.00e-117	414.00
IUUC-Mlu-067544	Myotis lucifugus	36.79	1.00e-115	410.00
IUUC-Nfi-068502	Neosartorya fischeri	37.74	4.00e-73	269.00
IUUC-Ncr-068891	Neurospora crassa	29.52	2.00e-72	266.00
IUUC-Nle-069389	Nomascus leucogenys	36.74	2.00e-116	412.00
IUUC-Opr-071042	Ochotona princeps	43.10	1.00e-82	300.00
IUUC-Ont-071455	Oreochromis niloticus	44.96	3.00e-96	345.00
IUUC-Oan-073181	Ornithorhynchus anatinus	45.17	2.00e-95	342.00
IUUC-Ocu-073758	Oryctolagus cuniculus	37.58	1.00e-118	420.00
IUUC-Ola-086574	Oryzias latipes	43.86	3.00e-94	339.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.10	1.00e-121	429.00
IUUC-Oga-088827	Otolemur garnettii	36.59	3.00e-116	412.00
IUUC-Oar-089648	Ovis aries	37.00	8.00e-118	417.00
IUUC-Ptr-091195	Pan troglodytes	36.69	1.00e-116	413.00
IUUC-Pan-091978	Papio anubis	36.90	5.00e-117	414.00
IUUC-Psi-093598	Pelodiscus sinensis	36.69	5.00e-103	367.00
IUUC-Pma-094593	Petromyzon marinus	40.89	5.00e-59	221.00
IUUC-Pno-094823	Phaeosphaeria nodorum	31.80	1.00e-79	290.00
IUUC-Pfo-097120	Poecilia formosa	44.88	5.00e-96	344.00
IUUC-Pab-098771	Pongo abelii	36.74	2.00e-116	413.00
IUUC-Ppe-101686	Prunus persica	80.18	0.00e+00	1077.00
IUUC-Pgr-103603	Puccinia graminis	42.76	2.00e-70	260.00
IUUC-Ptt-103995	Puccinia triticina	43.27	2.00e-65	243.00
IUUC-Pte-104359	Pyrenophora teres	29.76	4.00e-79	288.00
IUUC-Rno-105064	Rattus norvegicus	36.69	3.00e-116	412.00
IUUC-Sha-106582	Sarcophilus harrisii	36.84	1.00e-117	416.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	34.59	5.00e-110	391.00
IUUC-Spo-108142	Schizosaccharomyces pombe	33.72	5.00e-110	391.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	29.79	5.00e-80	291.00
IUUC-Sly-111693	Solanum lycopersicum	74.74	0.00e+00	1006.00
IUUC-Sbi-114849	Sorghum bicolor	68.78	0.00e+00	903.00
IUUC-Ssc-115582	Sus scrofa	45.99	5.00e-94	337.00
IUUC-Tgu-116899	Taeniopygia guttata	44.39	2.00e-94	339.00
IUUC-Tru-118011	Takifugu rubripes	43.83	2.00e-93	336.00
IUUC-Tni-120598	Tetraodon nigroviridis	43.72	6.00e-94	338.00
IUUC-Tca-121247	Theobroma cacao	80.95	0.00e+00	1113.00
IUUC-Tre-121949	Trichoderma reesei	34.43	8.00e-59	221.00
IUUC-Tvi-122626	Trichoderma virens	31.64	7.00e-56	211.00
IUUC-Tur-126005	Triticum urartu	61.72	0.00e+00	775.00
IUUC-Tbe-127254	Tupaia belangeri	32.82	8.00e-95	340.00
IUUC-Ttr-128544	Tursiops truncatus	36.84	6.00e-117	414.00
IUUC-Vda-129761	Verticillium dahliae	38.62	2.00e-52	200.00
IUUC-Vpa-130485	Vicugna pacos	36.84	5.00e-117	414.00
IUUC-Vvi-131171	Vitis vinifera	81.04	0.00e+00	1091.00
IUUC-Xma-133583	Xiphophorus maculatus	44.36	1.00e-94	340.00
IUUC-Zma-135722	Zea mays	67.60	0.00e+00	907.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence