iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114854

UUCD1 version

UUC-SoB-01719

Ensembl Protein ID

Sb02g003660.1

UniProt Accession

A0A1B6Q946; A0A1B6Q946_SORBI

Genbank Protein ID

KXG34448.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G042600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g003660	Sb02g003660.1	Sb02g003660.1
Sb02g003660	Sb02g003660.2	Sb02g003660.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	3.10e-71	241.1	201	524
ULD/UDP/UBQ/UBQ_Other	7.50e-06	26.5	599	646

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +GlkN+g+tCYmNS+LQ+L++ip +r+++ +     ++ ++++ p+g++  +lq+lf +l ++++++vs++el+k++++  +   +++q+D+qE+ 
   Q: 201  VGLKNQGATCYMNSLLQTLYHIPYFRKAVYH-----MPTTENDMPSGSIPLALQSLFYKL-QYNDSSVSTKELTKSFGWDMHD--SFMQHDVQELN 288
           6******************************.....555556789***************.99999************98876..9********** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
           ++l ++le+++                          k +  + +i++lF+g+  + i c + d +s+r+e+f+dl+l+v+g +     ++  +++
   Q: 289  RVLSEKLEDKM--------------------------KGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCQ-----DVYASFD 353
           ***********..........................7899*******************************************.....9****** PP
   S: 193  sftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspeekqkekkkYeLiavv 284
           ++++ e+leg+nky+ +k  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++  + + ++++ Y L++v+
   Q: 354  KYVEVERLEGDNKYHADKH-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDrddgKYLSP-DADRNVRNLYTLHSVL 447
           *****************96.69***********************************************9887667666.667778********** PP
   S: 285  vHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.......................staYvlfYkr 337
           vHsG++++GHY+a+++   +++W++fdD++Vt+ + ++ lee+                        s+aY+l+Y r
   Q: 448  VHSGGVHGGHYYAFIRPtLSDQWFKFDDERVTKEDAKRALEEQYggeeelpqtnpglnntpfkftkySNAYMLVYIR 524
           ****************945677**************999997779******************************87 PP

ULD/UDP/UBQ/UBQ_Other

   S: 14   tlkvnpsdtVaeLKekiekklgippeqqrLiykGkiL....eddktLa 57
           ++++ +++t+a++Ke++ k++gip + qr +++ k +    +++++L+
   Q: 599  SFRIQKQMTFAQFKEEVAKEFGIPTQFQRFWLWAKRQnhtyRPNRPLS 646
           688999******************999999988544433337777776 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTTSPPPAEQ QQQEEEEVLV PHGPQQELPN GAQPMEVVPA EPAATVENQQ IEDPPISRFT 60
WTIENLSRVS TKKLYSEIFV VGGYKWRILI FPRGNNVEFL SMYLDVADSG VLPYGWTRYA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCGCCTCC CCCCTTCCAC CCTCGCGATC TCCACCTCCC TCCCCCACCA CCCCCGTAAC 60
CCACTTCTGG GTGGGCCCCC ACATCGCCGC CGGCGGACCC GCGCCTCCCC TCCCTACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000761	Aegilops tauschii	86.88	0.00e+00	1900.00
IUUC-Bdi-014920	Brachypodium distachyon	91.18	0.00e+00	1979.00
IUUC-Cme-027103	Cyanidioschyzon merolae	38.16	2.00e-126	447.00
IUUC-Eeu-035292	Erinaceus europaeus	38.07	2.00e-64	239.00
IUUC-Hvu-047749	Hordeum vulgare	94.91	0.00e+00	1681.00
IUUC-Lpe-050886	Leersia perrieri	82.99	0.00e+00	1777.00
IUUC-Loc-052234	Lepisosteus oculatus	39.83	5.00e-135	474.00
IUUC-Opr-071001	Ochotona princeps	37.40	2.00e-134	472.00
IUUC-Oba-075755	Oryza barthii	84.86	0.00e+00	1771.00
IUUC-Obr-076857	Oryza brachyantha	91.42	0.00e+00	1976.00
IUUC-Ogl-077038	Oryza glaberrima	91.60	0.00e+00	1955.00
IUUC-Ogu-078265	Oryza glumaepatula	86.87	0.00e+00	1828.00
IUUC-Oin-079988	Oryza indica	88.35	0.00e+00	1844.00
IUUC-Olo-080297	Oryza longistaminata	85.14	0.00e+00	1775.00
IUUC-Ome-081895	Oryza meridionalis	84.66	0.00e+00	1801.00
IUUC-Oni-082409	Oryza nivara	85.95	0.00e+00	1835.00
IUUC-Opu-084122	Oryza punctata	87.98	0.00e+00	1861.00
IUUC-Oru-085101	Oryza rufipogon	86.87	0.00e+00	1829.00
IUUC-Sit-110367	Setaria italica	93.66	0.00e+00	2029.00
IUUC-Tae-123595	Triticum aestivum	90.64	0.00e+00	1728.00
IUUC-Tur-126501	Triticum urartu	81.47	0.00e+00	1768.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence