iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000042165.8	ENSMUST00000192538.1	ENSMUSP00000141274.1
ENSMUSG00000042165.8	ENSMUST00000047300.7	ENSMUSP00000045065.7

Annotation

mRNA Expression
ArrayExpress	GXD
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/PRU	26.21	1.90e-02	35.00	IUUC-Sce-106377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Mus musculus

Protein Sequence
(Fasta)

MTTSGALFPS LVPGSRGSST KYLVEFRAGK MSLKGTTVTP DKRKGLVYIQ QTDDSLIHFC 60
WKDRTSGTVE DDLIIFPDDC EFKRVPQCPS GRVYVLKFKA GSKRLFFWMQ EPKTDQDEEH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCCTAGGC CGAGTGTGAG CACCGCCAGG ATGACGACTT CAGGCGCTCT GTTCCCAAGC 60
CTGGTGCCCG GCTCTCGGGG GTCTTCTACC AAATATTTGG TGGAGTTCCG GGCAGGAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006773--26S_Psome_Ubiquitin-recp_Rpn13
IPR032368--RPN13_C

Pfam

PF04683--Proteasom_Rpn13
PF16550--RPN13_C

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0008541--C:proteasome regulatory particle, lid subcomplex
GO:0061133--F:endopeptidase activator activity
GO:0070628--F:proteasome binding
GO:0043130--F:ubiquitin binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002306	Ailuropoda melanoleuca	97.09	8.00e-83	300.00
IUUC-Atr-002494	Amborella trichopoda	52.25	8.00e-33	134.00
IUUC-Aca-004810	Anolis carolinensis	91.76	5.00e-78	284.00
IUUC-Ath-007220	Arabidopsis thaliana	56.76	5.00e-35	141.00
IUUC-Ago-007904	Ashbya gossypii	32.35	7.00e-09	53.10
IUUC-Afl-008673	Aspergillus flavus	36.63	3.00e-13	69.30
IUUC-Ani-009170	Aspergillus nidulans	37.11	1.00e-12	67.40
IUUC-Aor-009975	Aspergillus oryzae	36.63	3.00e-13	69.30
IUUC-Ate-010404	Aspergillus terreus	36.63	8.00e-13	68.20
IUUC-Ame-011726	Astyanax mexicanus	87.12	7.00e-65	241.00
IUUC-Bdi-014600	Brachypodium distachyon	52.34	2.00e-30	126.00
IUUC-Cpo-021820	Cavia porcellus	97.09	1.00e-83	303.00
IUUC-Cin-025475	Ciona intestinalis	70.68	7.00e-56	211.00
IUUC-Csv-026094	Ciona savignyi	73.83	7.00e-49	187.00
IUUC-Cgl-026557	Colletotrichum gloeosporioides	39.22	7.00e-14	71.60
IUUC-Cne-026937	Cryptococcus neoformans	36.61	2.00e-18	86.30
IUUC-Eca-034182	Equus caballus	95.93	2.00e-80	292.00
IUUC-Eeu-035242	Erinaceus europaeus	96.51	3.00e-82	298.00
IUUC-Fca-036448	Felis catus	97.09	6.00e-83	301.00
IUUC-Fal-036857	Ficedula albicollis	91.76	4.00e-79	288.00
IUUC-Fso-038361	Fusarium solani	35.29	9.00e-12	64.70
IUUC-Ggr-039789	Gaeumannomyces graminis	33.65	2.00e-10	59.70
IUUC-Ggo-044790	Gorilla gorilla	97.09	2.00e-82	299.00
IUUC-Hsa-046024	Homo sapiens	97.09	2.00e-82	299.00
IUUC-Hvu-047480	Hordeum vulgare	45.39	3.00e-32	132.00
IUUC-Loc-052496	Lepisosteus oculatus	88.10	8.00e-68	251.00
IUUC-Mor-057247	Magnaporthe oryzae	36.70	1.00e-09	57.40
IUUC-Mpo-057457	Magnaporthe poae	34.62	9.00e-11	61.20
IUUC-Mtr-058738	Medicago truncatula	55.05	2.00e-32	132.00
IUUC-Mdo-062086	Monodelphis domestica	93.53	2.00e-79	289.00
IUUC-Mlu-068064	Myotis lucifugus	96.51	2.00e-82	299.00
IUUC-Nfi-068545	Neosartorya fischeri	35.64	9.00e-12	64.70
IUUC-Ncr-068847	Neurospora crassa	35.29	7.00e-12	65.10
IUUC-Ont-072472	Oreochromis niloticus	78.82	3.00e-70	258.00
IUUC-Obr-076216	Oryza brachyantha	46.81	1.00e-33	137.00
IUUC-Ogl-077663	Oryza glaberrima	54.13	1.00e-32	133.00
IUUC-Oin-079928	Oryza indica	54.13	1.00e-32	133.00
IUUC-Ome-081406	Oryza meridionalis	44.95	1.00e-22	100.00
IUUC-Osa-085922	Oryza sativa	54.13	1.00e-32	133.00
IUUC-Psi-093198	Pelodiscus sinensis	91.76	5.00e-78	285.00
IUUC-Pno-095051	Phaeosphaeria nodorum	33.63	3.00e-12	65.10
IUUC-Pab-098731	Pongo abelii	95.93	2.00e-78	285.00
IUUC-Ppe-101400	Prunus persica	53.15	3.00e-32	132.00
IUUC-Pte-104034	Pyrenophora teres	36.94	2.00e-13	70.10
IUUC-Pyt-104724	Pyrenophora triticirepentis	36.04	6.00e-13	68.60
IUUC-Sce-106377	Saccharomyces cerevisiae	35.90	1.10e-02	32.70
IUUC-Spo-108172	Schizosaccharomyces pombe	45.69	4.00e-26	112.00
IUUC-Ssl-108639	Sclerotinia sclerotiorum	34.95	1.00e-09	56.20
IUUC-Sly-111320	Solanum lycopersicum	54.13	6.00e-31	128.00
IUUC-Sbi-114588	Sorghum bicolor	54.13	6.00e-33	134.00
IUUC-Tru-118602	Takifugu rubripes	84.33	4.00e-64	238.00
IUUC-Tni-119694	Tetraodon nigroviridis	85.82	1.00e-64	240.00
IUUC-Tur-126552	Triticum urartu	38.30	3.00e-22	99.00
IUUC-Tme-126941	Tuber melanosporum	35.83	1.00e-18	87.40
IUUC-Vda-129665	Verticillium dahliae	36.00	1.00e-12	67.40
IUUC-Vvi-131383	Vitis vinifera	51.35	1.00e-32	133.00
IUUC-Zma-134939	Zea mays	53.70	3.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence