iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114089

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G004400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g000520	Sb05g000520.1	Sb05g000520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E1	6.60e-174	579.7	447	934

Active Site

Position(s)	Description	Evidence
628	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU10132}

Domain Profile

   S: 1    YDRQirlwGeeaqeklksakvllvGagglGcEllKnLvlaGv.....gsitvvDmdtvevsnlnrqFLfraedvgksKAevaaealkelnpdvnve 91
           YD Qi ++G++ q+kl+++k+++vG g+lGcE+lKnL+l+G+     g++tv+D+d +e+snl+rqFLfr++++g++K+ vaa a+  +np+ +ve
   Q: 447  YDAQISVLGAKLQKKLEQSKIFMVGSGALGCEFLKNLALMGIscsqnGKLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPKLHVE 542
           ************************************************************************************************ PP
   S: 92   aheesiteleeeiv...FfkkfdvVvlaldnrearrkvnrlclnarvpliesgtlGllGqvrviikgltecyscsddppqktiPfctlketpnaae 184
           a +++ ++++e+++   F + +d Vv+aldn+ ar++++++c++ ++pl+esgtlG + +++ +i++lte y +s+dpp+k++P+ct+ ++p +++
   Q: 543  ALQNRASPETENVFndaFWESLDAVVNALDNVTARMYIDSRCVYFQKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNID 638
           ************9999******************************************************************************** PP
   S: 185  htiewa............vlfnklleeeageeevlekldseekeegkdkvkselksedeenfeeaieiavkafakttinsikqllksfecdivtks 268
           h+++wa              +n +l++  g  + +     ++ ++ +++v + l++ + e+f+++i++a+ +f+ +++n +kql+  f+ d +t+s
   Q: 639  HCLTWArsefegllektpTEVNAFLSNPGGYATAARTAGDAQARDQLERVIECLETDKCETFQDCITWARLKFEDYFSNRVKQLTFTFPEDAMTSS 734
           *****************999999999999999999999999******************************************************* PP
   S: 269  kspfwv..........................................................sfcsnaealqvpekvekdeevvkasap.lyll 305
           ++pfw+                                                            +++  +++++ek+++   ++ ++a+ ++ l
   Q: 735  GAPFWSapkrfprplefsssdsshlnfllaasilraetfgipipdwaknptklaeavdkvivpdFQPKQGVKIETDEKATSLSSASVDDAAvIEEL 830
           ********************************************999988877777777666644444445555556666655555455449**** PP
   S: 306  lralerfekk..kgrkpgelsfekddds..avdlvtaaanlraeslgiepkldddlikeiagniipaiattnavvgGlaaqEviKvvsg..kfepl 395
           +++le+ +k+  +g  ++ ++fekddd   ++dl++ +an+ra +++i++ +d+ + k iag+iipaiat +a+  Gl+++E++Kv+ g  k e +
   Q: 831  IAKLETISKTlpPGFHMNPIQFEKDDDTnfHMDLIAGFANMRARNYSIPE-VDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLAGghKVEDY 925
           ********976689************************************.**************************************999**** PP
   S: 396  knfflfdae 404
           +n+f ++a+
   Q: 926  RNTFANLAI 934
           ****99876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLPRKRGVDA GEVQDLHNKA PRAAVPAQDK DKEVVAEMAA RAPEIDEDLH SRQLAVYGRE 60
TMKRLFGSNV LVSGLQGLGA EIAKNLVLAG VKSVTLHDDG KVELWDLSSN FFLSEKDVGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCGTCTCT TTTCTCTCTC GCGCACTCCT CCTCCGTCGT CAAACAAAAC CCTAGGCCAG 60
ACCAGAGCTC CTGCAGCAGA GCGGAGGTCA GCTCGCCGGG CATCGAGTCC ATCTCCTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0436--Ligase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR032420--E1_4HB
IPR032418--E1_FCCH
IPR016040--NAD(P)-bd_dom
IPR000594--ThiF_NAD_FAD-bd
IPR018965--Ub-activating_enz_E1_C
IPR019572--UBA_E1_Cys
IPR018075--UBQ-activ_enz_E1
IPR018074--UBQ-activ_enz_E1_CS
IPR033127--UBQ-activ_enz_E1_Cys_AS
IPR000011--UBQ/SUMO-activ_enz_E1-like

PROSITE

PS00536--UBIQUITIN_ACTIVAT_1
PS00865--UBIQUITIN_ACTIVAT_2

Pfam

PF16191--E1_4HB
PF16190--E1_FCCH
PF09358--E1_UFD
PF00899--ThiF
PF10585--UBA_e1_thiolCys

PRINTS

PR01849--UBIQUITINACT

SMART

SM00985--UBA_e1_C

Gene Ontology

GO:0005524--F:ATP binding
GO:0008641--F:small protein activating enzyme activity
GO:0006464--P:cellular protein modification process

KEGG

sbi:SORBI_05g000520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000456	Aegilops tauschii	91.83	0.00e+00	1902.00
IUUC-Aml-001311	Ailuropoda melanoleuca	45.81	0.00e+00	895.00
IUUC-Atr-002684	Amborella trichopoda	78.05	0.00e+00	1680.00
IUUC-Apl-004158	Anas platyrhynchos	39.25	0.00e+00	690.00
IUUC-Aca-004620	Anolis carolinensis	45.37	0.00e+00	894.00
IUUC-Afl-008455	Aspergillus flavus	45.49	0.00e+00	812.00
IUUC-Ani-009371	Aspergillus nidulans	45.50	0.00e+00	819.00
IUUC-Aor-010007	Aspergillus oryzae	45.49	0.00e+00	812.00
IUUC-Bta-012767	Bos taurus	46.33	0.00e+00	906.00
IUUC-Bci-013721	Botrytis cinerea	45.47	0.00e+00	819.00
IUUC-Bdi-014843	Brachypodium distachyon	91.37	0.00e+00	1870.00
IUUC-Cja-019152	Callithrix jacchus	44.97	0.00e+00	900.00
IUUC-Cfa-020622	Canis familiaris	44.17	0.00e+00	848.00
IUUC-Cpo-022526	Cavia porcellus	46.33	0.00e+00	890.00
IUUC-Csa-023780	Chlorocebus sabaeus	46.33	0.00e+00	905.00
IUUC-Cho-024682	Choloepus hoffmanni	36.67	3.00e-104	372.00
IUUC-Cin-025790	Ciona intestinalis	43.73	0.00e+00	872.00
IUUC-Csv-026084	Ciona savignyi	42.90	0.00e+00	854.00
IUUC-Cgl-026512	Colletotrichum gloeosporioides	47.96	0.00e+00	899.00
IUUC-Dno-028884	Dasypus novemcinctus	46.03	0.00e+00	897.00
IUUC-Ete-033124	Echinops telfairi	39.97	3.00e-133	468.00
IUUC-Eca-033330	Equus caballus	45.94	0.00e+00	895.00
IUUC-Eeu-035323	Erinaceus europaeus	40.14	5.00e-154	537.00
IUUC-Fca-036255	Felis catus	45.84	0.00e+00	889.00
IUUC-Fal-036848	Ficedula albicollis	39.15	0.00e+00	705.00
IUUC-Fox-038007	Fusarium oxysporum	47.25	5.00e-138	483.00
IUUC-Gmo-039338	Gadus morhua	44.97	0.00e+00	848.00
IUUC-Gga-040747	Gallus gallus	39.15	0.00e+00	689.00
IUUC-Gac-041773	Gasterosteus aculeatus	45.21	0.00e+00	854.00
IUUC-Gma-043165	Glycine max	82.97	0.00e+00	1755.00
IUUC-Ggo-045336	Gorilla gorilla	46.13	0.00e+00	883.00
IUUC-Hsa-045982	Homo sapiens	45.94	0.00e+00	880.00
IUUC-Hvu-047418	Hordeum vulgare	91.07	0.00e+00	1896.00
IUUC-Itr-048460	Ictidomys tridecemlineatus	46.23	0.00e+00	899.00
IUUC-Lch-050371	Latimeria chalumnae	44.82	0.00e+00	895.00
IUUC-Loc-052936	Lepisosteus oculatus	46.81	0.00e+00	892.00
IUUC-Lma-053315	Leptosphaeria maculans	45.33	0.00e+00	883.00
IUUC-Laf-053948	Loxodonta africana	46.48	0.00e+00	881.00
IUUC-Mcc-055843	Macaca mulatta	46.23	0.00e+00	900.00
IUUC-Meu-056258	Macropus eugenii	45.45	0.00e+00	899.00
IUUC-Mtr-058572	Medicago truncatula	81.44	0.00e+00	1688.00
IUUC-Mga-059721	Meleagris gallopavo	39.11	0.00e+00	668.00
IUUC-Mmr-061405	Microcebus murinus	45.26	0.00e+00	860.00
IUUC-Mdo-062032	Monodelphis domestica	43.95	0.00e+00	865.00
IUUC-Mmu-063721	Mus musculus	45.50	0.00e+00	890.00
IUUC-Mac-065505	Musa acuminata	82.58	0.00e+00	1735.00
IUUC-Mpu-066409	Mustela putorius furo	45.94	0.00e+00	899.00
IUUC-Mlu-067217	Myotis lucifugus	46.13	0.00e+00	889.00
IUUC-Ont-071671	Oreochromis niloticus	45.74	0.00e+00	875.00
IUUC-Oan-073268	Ornithorhynchus anatinus	41.04	0.00e+00	640.00
IUUC-Ocu-074544	Oryctolagus cuniculus	45.45	0.00e+00	907.00
IUUC-Oba-075120	Oryza barthii	91.83	0.00e+00	1884.00
IUUC-Ogl-077887	Oryza glaberrima	91.83	0.00e+00	1885.00
IUUC-Ome-081942	Oryza meridionalis	92.02	0.00e+00	1888.00
IUUC-Oni-082365	Oryza nivara	92.12	0.00e+00	1888.00
IUUC-Osa-085949	Oryza sativa	91.83	0.00e+00	1925.00
IUUC-Ola-087002	Oryzias latipes	46.65	0.00e+00	889.00
IUUC-Oga-088594	Otolemur garnettii	46.13	0.00e+00	884.00
IUUC-Oar-090068	Ovis aries	46.13	0.00e+00	901.00
IUUC-Ptr-090609	Pan troglodytes	40.65	0.00e+00	693.00
IUUC-Pan-092114	Papio anubis	46.33	0.00e+00	902.00
IUUC-Psi-093489	Pelodiscus sinensis	38.85	0.00e+00	698.00
IUUC-Ppa-095227	Physcomitrella patens	72.20	0.00e+00	1572.00
IUUC-Pfo-097184	Poecilia formosa	45.93	0.00e+00	877.00
IUUC-Pab-097861	Pongo abelii	46.13	0.00e+00	872.00
IUUC-Pop-098934	Populus trichocarpa	80.57	0.00e+00	1691.00
IUUC-Pca-100347	Procavia capensis	43.19	0.00e+00	717.00
IUUC-Ppe-102012	Prunus persica	80.27	0.00e+00	1727.00
IUUC-Pva-102584	Pteropus vampyrus	46.52	0.00e+00	928.00
IUUC-Pgr-103336	Puccinia graminis	45.71	0.00e+00	847.00
IUUC-Rno-105462	Rattus norvegicus	45.54	0.00e+00	879.00
IUUC-Sce-106245	Saccharomyces cerevisiae	45.76	0.00e+00	880.00
IUUC-Sha-107142	Sarcophilus harrisii	45.35	0.00e+00	900.00
IUUC-Sja-107841	Schizosaccharomyces japonicus	45.97	0.00e+00	867.00
IUUC-Spo-108034	Schizosaccharomyces pombe	44.06	0.00e+00	833.00
IUUC-Ssl-108497	Sclerotinia sclerotiorum	44.67	0.00e+00	817.00
IUUC-Smo-108912	Selaginella moellendorffii	73.24	0.00e+00	1550.00
IUUC-Sit-110281	Setaria italica	96.96	0.00e+00	2023.00
IUUC-Sly-111237	Solanum lycopersicum	80.30	0.00e+00	1646.00
IUUC-Stu-112109	Solanum tuberosum	79.88	0.00e+00	1710.00
IUUC-Sar-113737	Sorex araneus	46.03	0.00e+00	889.00
IUUC-Ssc-115777	Sus scrofa	45.78	0.00e+00	892.00
IUUC-Tgu-116565	Taeniopygia guttata	39.15	0.00e+00	700.00
IUUC-Tru-118742	Takifugu rubripes	46.44	0.00e+00	837.00
IUUC-Tsy-119436	Tarsius syrichta	35.99	6.00e-166	577.00
IUUC-Tni-120401	Tetraodon nigroviridis	46.54	0.00e+00	845.00
IUUC-Tca-121436	Theobroma cacao	80.84	0.00e+00	1716.00
IUUC-Tae-125113	Triticum aestivum	90.79	0.00e+00	1852.00
IUUC-Tur-126330	Triticum urartu	91.93	0.00e+00	1907.00
IUUC-Tme-127055	Tuber melanosporum	44.22	0.00e+00	806.00
IUUC-Ttr-128331	Tursiops truncatus	45.94	0.00e+00	881.00
IUUC-Vda-129977	Verticillium dahliae	47.51	0.00e+00	830.00
IUUC-Vpa-130716	Vicugna pacos	39.45	0.00e+00	666.00
IUUC-Vvi-130857	Vitis vinifera	82.92	0.00e+00	1751.00
IUUC-Xtr-132947	Xenopus tropicalis	38.13	0.00e+00	646.00
IUUC-Xma-133805	Xiphophorus maculatus	45.62	0.00e+00	854.00
IUUC-Yli-134547	Yarrowia lipolytica	45.63	0.00e+00	874.00
IUUC-Zma-135052	Zea mays	96.13	0.00e+00	2052.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence