iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111610

Ensembl Protein ID

Solyc06g064440.2.1

UniProt Accession

K4C776; K4C776_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g064440.2	Solyc06g064440.2.1	Solyc06g064440.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-06	29.0	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d+  +d +   p CgH+fh  C+ +w         + +CPlCr
   Q: 118  CSVCLGDYlaDDKLQQIPaCGHTFHMICIDHW------LAAHNTCPLCR 160
           9*****9998554666779*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSLTGKGYSD PHQESSNNYH NASSNCCSEA LAQLKLYQAF IFSVPILFAF ILLLLFYLFY 60
LRRQRVDWSS LRMRTSTFHT ANESDELSRC EMGLKKEVRE MLPIIVFKES FSVKDTQCSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATAACATAC CATACCATAC CGACCCGATG ATCCACCTAA ATTTGGGAAG GAAAATGCTT 60
AATTTTTGTC GATGTATGTA ATAAGGCCCC ACATATTACT ACTTCCCAAT TTCCAATTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sly:101251996

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005500	Arabidopsis lyrata	59.38	6.00e-45	173.00
IUUC-Ath-007076	Arabidopsis thaliana	58.75	6.00e-45	172.00
IUUC-Bdi-014087	Brachypodium distachyon	59.31	3.00e-38	150.00
IUUC-Bol-016221	Brassica oleracea	67.42	4.00e-42	163.00
IUUC-Bra-017381	Brassica rapa	67.01	2.00e-34	137.00
IUUC-Cho-024749	Choloepus hoffmanni	41.05	4.00e-14	72.40
IUUC-Dno-029617	Dasypus novemcinctus	41.41	6.00e-15	75.10
IUUC-Gma-043458	Glycine max	61.38	4.00e-36	143.00
IUUC-Lpe-051002	Leersia perrieri	61.22	2.00e-41	161.00
IUUC-Mtr-058067	Medicago truncatula	60.00	5.00e-44	170.00
IUUC-Mga-059307	Meleagris gallopavo	38.95	7.00e-15	75.10
IUUC-Mac-065514	Musa acuminata	63.64	6.00e-41	159.00
IUUC-Oba-075393	Oryza barthii	63.04	7.00e-41	159.00
IUUC-Obr-076149	Oryza brachyantha	49.76	2.00e-41	161.00
IUUC-Ogl-077140	Oryza glaberrima	63.04	7.00e-41	159.00
IUUC-Ogu-078926	Oryza glumaepatula	63.04	7.00e-41	159.00
IUUC-Oin-080003	Oryza indica	67.11	3.00e-31	127.00
IUUC-Ome-081399	Oryza meridionalis	62.32	2.00e-40	157.00
IUUC-Oni-082750	Oryza nivara	63.04	8.00e-41	159.00
IUUC-Opu-083446	Oryza punctata	63.04	5.00e-41	159.00
IUUC-Oru-084873	Oryza rufipogon	63.04	7.00e-41	159.00
IUUC-Osa-085898	Oryza sativa	63.04	7.00e-41	159.00
IUUC-Pop-099279	Populus trichocarpa	48.73	2.00e-29	121.00
IUUC-Ppe-101232	Prunus persica	64.58	3.00e-39	154.00
IUUC-Smo-109572	Selaginella moellendorffii	46.85	3.00e-26	110.00
IUUC-Sit-110610	Setaria italica	59.46	4.00e-39	154.00
IUUC-Stu-112875	Solanum tuberosum	91.64	6.00e-135	472.00
IUUC-Sbi-114101	Sorghum bicolor	60.84	1.00e-40	158.00
IUUC-Ssc-115345	Sus scrofa	40.40	1.00e-14	73.90
IUUC-Tca-121298	Theobroma cacao	58.25	5.00e-48	184.00
IUUC-Tae-123494	Triticum aestivum	56.08	2.00e-39	154.00
IUUC-Tur-126109	Triticum urartu	55.41	1.00e-39	155.00
IUUC-Vvi-131331	Vitis vinifera	77.44	8.00e-47	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence