iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132351

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

E3 ubiquitin-protein ligase Midline-1-like

Genbank Nucleotide ID

AAMC01037031

Gene Name

LOC100490368

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000004897.3	ENSXETT00000010635.2	ENSXETP00000010635.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-07	29.8	8	79
E3 activity/RING/RING	2.90e-08	34.3	12	55

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedl.vPnltlrrliqawce 70
           +e+ C+I l++ +dPv+lp+G+ y r +I   l++++     +cP +r++++++     n tl ++ ++++ 
   Q: 8    DELSCSICLNIYTDPVMLPCGHNYCRGCIGGLLDTQEGsggySCPECRAEFQQRPAlQRNRTLGNIAERFLP 79
           899****************************99777767788********9766443888888887777765 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ + d p+ lpCgH +++ C+  + +  ++ s+  +CP Cr
   Q: 12   CSICLNIYTD-PVMLPCGHNYCRGCIGGL-LDTQEGSGGYSCPECR 55
           **********.999***********9777.67789**********8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MAAADLRDEL SCSICLNIYT DPVMLPCGHN YCRGCIGGLL DTQEGSGGYS CPECRAEFQQ 60
RPALQRNRTL GNIAERFLPA QSEQQGAPGI YCTYCIQSPV AATKSCLHCE ASLCDNHVRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCTG CTGATCTGAG AGATGAGCTG AGCTGCTCCA TCTGCCTGAA TATCTATACG 60
GACCCGGTAA TGCTGCCCTG CGGCCATAAC TACTGCCGGG GCTGTATTGG GGGGCTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003649--Bbox_C
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00502--BBC
SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014581	Brachypodium distachyon	40.00	1.00e-08	54.30
IUUC-Oin-080164	Oryza indica	40.00	7.00e-10	57.00
IUUC-Tur-126062	Triticum urartu	38.75	1.00e-07	51.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence