iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057877

Ensembl Protein ID

KEH22539

UniProt Accession

A0A072TYF9; A0A072TYF9_MEDTR

Genbank Protein ID

KEH22539.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g053260

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g053260	KEH22539	KEH22539

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-29	103.7	78	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            p+ef+Cp+s+e MrdPv+++sG+tydr  I++w++ g++tcP t+q l+++ l+Pn+ +r++i++w + ++
   Q: 78   FPDEFKCPLSKEFMRDPVIVASGQTYDRPFIQRWFNAGNRTCPQTHQVLSHTLLTPNHLIREMIEKWSKNQG 149
           69*****************************************************************98775 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAKPGVLDSD PEVMLKKALE LKKELKKLVK SIVDDEDISI EAIDKAKETL CVLKDLKLRK 60
KSQSSNSMSF KINKNVTFPD EFKCPLSKEF MRDPVIVASG QTYDRPFIQR WFNAGNRTCP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCAATGA AATGAAATGA GATCTTTTTA TATATAAGAA ACAAAAAAAC AAAGTCTAGT 60
GAGAGAAACA CTAAGTTTTG TGTCTTTCTT TTTCTCTTAA CACAATTCAT TGTTACTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_7g053260

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	41.65	4.00e-78	285.00
IUUC-Aly-006420	Arabidopsis lyrata	57.11	2.00e-142	498.00
IUUC-Ath-007457	Arabidopsis thaliana	56.47	1.00e-139	489.00
IUUC-Bdi-014069	Brachypodium distachyon	48.84	3.00e-102	365.00
IUUC-Bol-015599	Brassica oleracea	56.74	1.00e-139	489.00
IUUC-Bra-017759	Brassica rapa	55.36	7.00e-134	469.00
IUUC-Gma-043611	Glycine max	78.23	0.00e+00	670.00
IUUC-Hvu-047411	Hordeum vulgare	45.03	3.00e-74	271.00
IUUC-Oba-075311	Oryza barthii	48.11	2.00e-98	352.00
IUUC-Obr-076232	Oryza brachyantha	47.57	2.00e-98	351.00
IUUC-Ogl-077647	Oryza glaberrima	48.43	1.00e-103	369.00
IUUC-Ogu-078448	Oryza glumaepatula	48.17	2.00e-103	368.00
IUUC-Oin-079693	Oryza indica	48.11	9.00e-99	352.00
IUUC-Olo-080462	Oryza longistaminata	48.04	1.00e-103	369.00
IUUC-Ome-081796	Oryza meridionalis	48.17	3.00e-103	368.00
IUUC-Oni-082158	Oryza nivara	48.17	3.00e-103	368.00
IUUC-Opu-084131	Oryza punctata	48.43	4.00e-104	370.00
IUUC-Oru-084335	Oryza rufipogon	48.17	3.00e-103	368.00
IUUC-Osa-085556	Oryza sativa	48.17	3.00e-103	368.00
IUUC-Pop-099806	Populus trichocarpa	64.72	2.00e-171	594.00
IUUC-Ppe-101662	Prunus persica	66.02	8.00e-169	585.00
IUUC-Sit-110812	Setaria italica	47.64	4.00e-98	350.00
IUUC-Sly-110911	Solanum lycopersicum	63.04	1.00e-165	575.00
IUUC-Stu-112732	Solanum tuberosum	62.83	1.00e-163	568.00
IUUC-Tca-121080	Theobroma cacao	67.60	5.00e-177	613.00
IUUC-Tae-125809	Triticum aestivum	45.38	2.00e-83	302.00
IUUC-Tur-126060	Triticum urartu	41.09	6.00e-78	284.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence