iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016627

Ensembl Protein ID

Bra013776.1-P

UniProt Accession

M4DBB6; M4DBB6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013776	Bra013776.1	Bra013776.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	78.00	1.00e-57	218.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKRSASNSVT NGDASNKKMK KTTEEDSEIG FANLDENLLY EVLKHVDART LATSSCVSKI 60
WHRTAQDERL WELICTRHWA NIGCSQHQLR FVVLALGGFK QLHSLYLWPL SSPNQHGRLG 120

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Nucleotide Sequence
(Fasta)

ATGAAACGCA GTGCTTCAAA CTCAGTTACA AACGGTGACG CGAGTAACAA GAAGATGAAA 60
AAGACCACAG AGGAAGATTC AGAAATCGGA TTCGCCAACT TAGACGAGAA TCTACTCTAC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010162--P:seed dormancy process
GO:0009845--P:seed germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	60.47	7.00e-30	123.00
IUUC-Aly-006435	Arabidopsis lyrata	79.33	3.00e-61	226.00
IUUC-Ath-007482	Arabidopsis thaliana	78.00	8.00e-59	218.00
IUUC-Bdi-014906	Brachypodium distachyon	45.45	9.00e-25	106.00
IUUC-Bol-016273	Brassica oleracea	98.63	1.00e-77	281.00
IUUC-Ete-032914	Echinops telfairi	32.73	2.00e-03	35.40
IUUC-Eeu-035144	Erinaceus europaeus	34.04	5.20e-02	31.20
IUUC-Gac-041737	Gasterosteus aculeatus	34.04	7.00e-04	37.70
IUUC-Gma-043301	Glycine max	54.07	2.00e-42	164.00
IUUC-Hsa-046251	Homo sapiens	31.75	2.00e-05	41.60
IUUC-Hvu-047070	Hordeum vulgare	53.25	1.00e-22	99.40
IUUC-Lch-049438	Latimeria chalumnae	26.32	6.00e-03	35.40
IUUC-Loc-052282	Lepisosteus oculatus	28.57	1.00e-03	37.70
IUUC-Mtr-057791	Medicago truncatula	56.25	8.00e-44	169.00
IUUC-Mac-064781	Musa acuminata	54.24	7.00e-27	112.00
IUUC-Mpu-065732	Mustela putorius furo	26.51	4.00e-04	39.30
IUUC-Opr-070849	Ochotona princeps	31.75	4.00e-05	41.60
IUUC-Ont-071234	Oreochromis niloticus	33.33	1.00e-03	37.00
IUUC-Oan-072882	Ornithorhynchus anatinus	31.25	3.00e-05	41.20
IUUC-Obr-076578	Oryza brachyantha	49.15	5.00e-27	114.00
IUUC-Ogl-077389	Oryza glaberrima	56.41	9.00e-19	86.70
IUUC-Oin-079212	Oryza indica	56.41	8.00e-19	86.70
IUUC-Ola-087439	Oryzias latipes	34.04	2.00e-03	36.20
IUUC-Pma-094686	Petromyzon marinus	33.33	2.00e-03	35.00
IUUC-Pfo-096195	Poecilia formosa	34.48	5.00e-04	38.50
IUUC-Pop-098990	Populus trichocarpa	52.22	9.00e-43	165.00
IUUC-Ppe-102068	Prunus persica	56.43	4.00e-36	143.00
IUUC-Smo-108701	Selaginella moellendorffii	48.61	1.00e-15	75.50
IUUC-Sit-110635	Setaria italica	46.67	5.00e-22	97.10
IUUC-Sly-111686	Solanum lycopersicum	50.00	3.00e-20	90.90
IUUC-Stu-111934	Solanum tuberosum	47.88	2.00e-21	95.50
IUUC-Sbi-113872	Sorghum bicolor	51.95	1.00e-16	79.70
IUUC-Tni-119768	Tetraodon nigroviridis	34.48	5.00e-04	38.50
IUUC-Tca-121336	Theobroma cacao	63.58	1.00e-48	184.00
IUUC-Tvi-122264	Trichoderma virens	30.14	2.00e-04	40.40
IUUC-Vvi-131285	Vitis vinifera	61.11	3.00e-39	154.00
IUUC-Xma-133836	Xiphophorus maculatus	34.48	4.00e-04	38.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence