iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121755

Ensembl Protein ID

EOX93084

UniProt Accession

A0A061DK25; A0A061DK25_THECC

Genbank Protein ID

EOX93084.1

Protein Name

Transducin family protein / WD-40 repeat family protein isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_001929

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_001929	EOX93085	EOX93085
TCM_001929	EOX93084	EOX93084

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-24	85.1	565	597
UBD/Beta-Prp	2.40e-45	155.9	304	509

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH++ v+c+++   + ++l+s+sdD ti++W l
   Q: 565  GHSGAVNCVSWnpaNPHMLASASDDRTIRIWGL 597
           8***********963399*************86 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncv 143
           +  l+ h++ev+ ++fs++gk+l+++s+D+   +w  d +  +  h+l+gh++ + ++s+sp+++ l++ +  +++r wd+++g+cl+  ++   g+v+c 
   Q: 304  VGILQAHTDEVWFLQFSHNGKYLASSSNDQSTIIWevDANGVSLKHILSGHQKPISAVSWSPDDHQLLTCGVEEVVRRWDVSSGECLNVYEKAGLGMVSCG 404
           67899******************************88888999*********************************************8888888888886 PP
   S: 144  vvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
            ++pdg+ ++sG +D+ + +W l  gk l+ ++g+ t ++  l+++s+gk+++s+ + + + l d +++  v++l++ +++++s  +s+++ +l++    +
   Q: 405  -WSPDGKWIFSGVNDKSICMWEL-EGKELECWKGQRTLKISDLEITSDGKQIISICRETAILLLDREAK--VERLIEEDQTITSFSLSRDNRFLLVNLLNQ 501
           .7788******************.89999************************************9888..9****************999999888899* PP
   S: 245  siriWdlr 252
            i +W+++
   Q: 502  EIHLWNIE 509
           *****975 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGGVEDDEPA SKRMKLSSEE LRRLSNGSTI KEPVAGSSGD LMARPLQSEG GEEVVGSKGV 60
IKKVEFVRII TKALYSLGYI KSGAHLEEES GIPLHSSVVN VFMRQILEGN WDESVVTLHN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCATTGCCT TAAGCTAAAT GCTCAATTCA CACAGCCATC ATCTCTCTCA CTCCTACATT 60
ATAACCCTCC CTCTTGAGTT GGTTTCCTCC ACGCAAAGAG AAAAAGAAAA ACTCATCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009455	Aspergillus nidulans	29.48	3.00e-67	249.00
IUUC-Cho-024572	Choloepus hoffmanni	37.37	4.00e-48	184.00
IUUC-Cin-025474	Ciona intestinalis	41.16	2.00e-49	188.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	30.64	2.00e-64	239.00
IUUC-Gma-044009	Glycine max	71.45	0.00e+00	860.00
IUUC-Kpa-049141	Komagataella pastoris	29.89	6.00e-59	221.00
IUUC-Mtr-058261	Medicago truncatula	69.31	0.00e+00	840.00
IUUC-Pop-099989	Populus trichocarpa	75.48	0.00e+00	922.00
IUUC-Pca-100574	Procavia capensis	42.42	2.00e-40	159.00
IUUC-Pgr-103411	Puccinia graminis	47.62	6.00e-30	125.00
IUUC-Sce-106152	Saccharomyces cerevisiae	37.40	5.00e-18	85.90
IUUC-Sly-111282	Solanum lycopersicum	64.03	0.00e+00	734.00
IUUC-Stu-112726	Solanum tuberosum	59.87	0.00e+00	729.00
IUUC-Sar-113539	Sorex araneus	44.51	6.00e-36	144.00
IUUC-Tvi-122376	Trichoderma virens	30.42	3.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence