iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099669

Ensembl Protein ID

POPTR_0014s01520.1

UniProt Accession

B9IBQ2; B9IBQ2_POPTR

Genbank Protein ID

EEE98339.1

Protein Name

Transducin-related family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_572025; POPTR_0014s01520g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s01520	POPTR_0014s01520.1	POPTR_0014s01520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-11	42.6	207	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWD 29
           ++v ++ + +d  ++ sGs Dg i++WD
   Q: 207  GRVLSVTWsPDaSRIYSGSSDGFIRCWD 234
           6799************************ PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLGAAYRNSS IEWRPSPVVS LATSADESQV AAAREDGSLE IWLVSPGAVG WHNQLTIHGN 60
PNSRVSSLAW CRAGSKGLPC GRLFSSSIDG SVSEWDLFHL KQKNVLESIG VSIWQMAVAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGCGTCGC CTTCTTTCAT GTCCCTCTCT CTCACCGCTT CATCACTTCC TACTAACTTA 60
AACCCTAGAT AATATAATTC GCCGATTTCT CTTTTGGCTT CGAGTTTAGC CTTTTAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0014s01520g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001310	Ailuropoda melanoleuca	24.58	5.00e-54	205.00
IUUC-Apl-003367	Anas platyrhynchos	34.91	7.00e-19	85.90
IUUC-Aca-004429	Anolis carolinensis	25.27	1.00e-24	106.00
IUUC-Acl-008229	Aspergillus clavatus	26.51	1.00e-25	111.00
IUUC-Afl-008438	Aspergillus flavus	26.51	6.00e-25	109.00
IUUC-Afu-008910	Aspergillus fumigatus	26.67	2.00e-25	110.00
IUUC-Ani-009321	Aspergillus nidulans	28.03	4.00e-30	126.00
IUUC-Ang-009592	Aspergillus niger	31.91	2.00e-20	94.40
IUUC-Aor-010220	Aspergillus oryzae	26.51	6.00e-25	108.00
IUUC-Ate-010317	Aspergillus terreus	27.09	2.00e-26	114.00
IUUC-Ame-010957	Astyanax mexicanus	24.58	6.00e-47	181.00
IUUC-Bgr-012057	Blumeria graminis	25.71	4.00e-33	136.00
IUUC-Bta-012473	Bos taurus	24.39	1.00e-50	194.00
IUUC-Cja-019942	Callithrix jacchus	24.18	3.00e-54	206.00
IUUC-Cfa-020549	Canis familiaris	25.00	2.00e-41	162.00
IUUC-Csa-023773	Chlorocebus sabaeus	24.36	2.00e-54	206.00
IUUC-Cho-024302	Choloepus hoffmanni	26.00	1.00e-45	177.00
IUUC-Dre-027460	Danio rerio	26.18	9.00e-34	138.00
IUUC-Dno-029594	Dasypus novemcinctus	24.91	2.00e-54	206.00
IUUC-Dor-030564	Dipodomys ordii	23.72	2.00e-19	90.50
IUUC-Ete-032655	Echinops telfairi	24.92	2.00e-39	156.00
IUUC-Eca-033838	Equus caballus	23.99	1.00e-54	207.00
IUUC-Eeu-034548	Erinaceus europaeus	23.55	5.00e-49	188.00
IUUC-Fca-035715	Felis catus	24.61	3.00e-55	209.00
IUUC-Fal-037394	Ficedula albicollis	27.38	3.00e-43	169.00
IUUC-Gmo-039235	Gadus morhua	26.31	2.00e-48	186.00
IUUC-Ggr-040043	Gaeumannomyces graminis	26.67	3.00e-25	110.00
IUUC-Gac-042466	Gasterosteus aculeatus	23.87	4.00e-48	185.00
IUUC-Ggo-045416	Gorilla gorilla	24.73	2.00e-50	193.00
IUUC-Hsa-046115	Homo sapiens	24.57	2.00e-53	203.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	24.36	1.00e-54	207.00
IUUC-Lch-050153	Latimeria chalumnae	24.24	3.00e-45	176.00
IUUC-Laf-053613	Loxodonta africana	24.18	1.00e-53	204.00
IUUC-Mcc-055707	Macaca mulatta	24.69	1.00e-53	203.00
IUUC-Meu-056800	Macropus eugenii	27.16	2.00e-22	100.00
IUUC-Mmr-061115	Microcebus murinus	24.70	1.00e-51	197.00
IUUC-Mdo-062235	Monodelphis domestica	24.91	1.00e-53	204.00
IUUC-Mmu-063158	Mus musculus	24.79	9.00e-55	207.00
IUUC-Mpu-065805	Mustela putorius furo	24.51	5.00e-55	208.00
IUUC-Mlu-066951	Myotis lucifugus	24.76	2.00e-54	206.00
IUUC-Nfi-068295	Neosartorya fischeri	26.96	4.00e-26	113.00
IUUC-Ncr-068880	Neurospora crassa	22.33	2.00e-19	90.50
IUUC-Nle-069657	Nomascus leucogenys	24.48	2.00e-54	206.00
IUUC-Opr-070250	Ochotona princeps	23.94	3.00e-48	186.00
IUUC-Ont-072642	Oreochromis niloticus	23.74	1.00e-42	167.00
IUUC-Ocu-074741	Oryctolagus cuniculus	24.54	5.00e-51	195.00
IUUC-Olo-080370	Oryza longistaminata	60.03	0.00e+00	707.00
IUUC-Ola-086466	Oryzias latipes	24.12	6.00e-42	165.00
IUUC-Olu-087761	Ostreococcus lucimarinus	25.52	3.00e-68	252.00
IUUC-Oga-088721	Otolemur garnettii	25.27	9.00e-46	177.00
IUUC-Oar-089532	Ovis aries	24.21	6.00e-51	195.00
IUUC-Ptr-091604	Pan troglodytes	24.48	1.00e-54	207.00
IUUC-Psi-093070	Pelodiscus sinensis	25.12	1.00e-47	184.00
IUUC-Pma-094201	Petromyzon marinus	26.59	5.00e-31	128.00
IUUC-Pno-094924	Phaeosphaeria nodorum	24.74	3.00e-10	60.10
IUUC-Pfo-097207	Poecilia formosa	24.77	1.00e-42	167.00
IUUC-Pab-097746	Pongo abelii	24.36	3.00e-54	206.00
IUUC-Pca-100562	Procavia capensis	24.65	1.00e-37	150.00
IUUC-Pva-103054	Pteropus vampyrus	25.03	1.00e-55	210.00
IUUC-Pte-104064	Pyrenophora teres	25.73	4.00e-23	103.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	25.86	2.00e-22	100.00
IUUC-Rno-105155	Rattus norvegicus	24.21	2.00e-52	200.00
IUUC-Sce-106369	Saccharomyces cerevisiae	21.48	5.00e-25	108.00
IUUC-Sha-107149	Sarcophilus harrisii	24.54	1.00e-51	197.00
IUUC-Spo-108372	Schizosaccharomyces pombe	22.71	7.00e-42	165.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	22.94	1.00e-27	118.00
IUUC-Sar-113254	Sorex araneus	24.36	7.00e-14	72.00
IUUC-Sre-114985	Sporisorium reilianum	32.19	2.00e-11	64.70
IUUC-Tgu-117407	Taeniopygia guttata	26.99	5.00e-23	101.00
IUUC-Tru-118733	Takifugu rubripes	22.03	6.00e-37	148.00
IUUC-Tsy-119213	Tarsius syrichta	26.95	2.00e-27	117.00
IUUC-Tni-120894	Tetraodon nigroviridis	27.50	2.00e-30	125.00
IUUC-Tre-121958	Trichoderma reesei	23.45	1.00e-25	111.00
IUUC-Tvi-122290	Trichoderma virens	24.67	2.00e-19	91.30
IUUC-Tae-125441	Triticum aestivum	56.69	0.00e+00	881.00
IUUC-Ttr-128720	Tursiops truncatus	24.12	1.00e-52	200.00
IUUC-Uma-129564	Ustilago maydis	26.45	2.00e-11	64.70
IUUC-Vpa-130412	Vicugna pacos	25.41	5.00e-26	112.00
IUUC-Xtr-131828	Xenopus tropicalis	25.56	2.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence