iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006764

UUCD1 version

UUC-ArT-00275

Ensembl Protein ID

AT2G43770.1

UniProt Accession

O22826; O22826_ARATH

Genbank Protein ID

AAB64029.1; AAM13181.1; AAP68267.1; AEC10322.1

Protein Name

At2g43770; Putative splicing factor; Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

AC002333; AY093182; BT008828; CP002685

Gene Name

At2g43770; F18O19.12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G43770	AT2G43770.1	AT2G43770.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
iRefIndex	HINT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-43	144.4	94	132
UBD/Beta-Prp	2.30e-61	208.5	48	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ + +l++ sd   +vs+s D+t++ WD+ tg+++k
   Q: 94   GHKNAILDLHWtSDgSQIVSASPDKTVRAWDVETGKQIK 132
           8***********99899******************9976 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncv 143
            lsgh ++v+++kf+p g ++++gs Dr i +w +  ++k +++lkgh++ +l+l++  +g+ +vs+s d+t+r wd+etg+ ++   ++h+++vn+ 
   Q: 48   LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHgDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIK-KMAEHSSFVNSC 144
           58*******************************998799**********************************************.99********** PP
   S: 144  vvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsg 240
           +    g  l++sGs+D+t +lWd+++   ++t+   ++ +++ +sf++    + +g+ d++vk+wdl++ge  +tl+gh+d+++ + +sp++ +l++ 
   Q: 145  CPTRRGpPLIISGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTN 240
           *********************************5..8************************************************************* PP
   S: 241  ssDgsiriWdlr....sgdllktlqlhnss 266
           ++D+ + +Wd+r    ++ ++k +++h+++
   Q: 241  GMDNKLCVWDMRpyapQNRCVKIFEGHQHN 270
           *********998554467788888888765 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEIMSRENET ALSGPRPMEW STVPHSASQG PGPNGKNRTS SLEAPIMLLS GHPSAVYTMK 60
FNPAGTLIAS GSHDREIFLW RVHGDCKNFM VLKGHKNAIL DLHWTSDGSQ IVSASPDKTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACCAAAAT TAAATACAGA CTTGTTTAAT TTCTGAATCT CTCTCTTCCT CTTTCTCGCG 60
AGCTTTTTCT CTCTGGGTTT AGGGTTCCGG TAATTTTGCG ACGACACCGA GCGATTCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex

KEGG

ath:AT2G43770

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	77.58	3.00e-162	563.00
IUUC-Aml-001428	Ailuropoda melanoleuca	61.86	2.00e-110	391.00
IUUC-Atr-003164	Amborella trichopoda	78.68	5.00e-165	572.00
IUUC-Apl-003447	Anas platyrhynchos	60.92	3.00e-107	380.00
IUUC-Aca-004270	Anolis carolinensis	57.65	2.00e-111	394.00
IUUC-Aly-005659	Arabidopsis lyrata	98.25	0.00e+00	707.00
IUUC-Acl-008324	Aspergillus clavatus	45.68	3.00e-88	317.00
IUUC-Afl-008607	Aspergillus flavus	45.97	1.00e-83	301.00
IUUC-Afu-008998	Aspergillus fumigatus	45.68	2.00e-88	318.00
IUUC-Ani-009363	Aspergillus nidulans	45.37	5.00e-89	320.00
IUUC-Ang-009513	Aspergillus niger	43.89	1.00e-78	285.00
IUUC-Aor-010237	Aspergillus oryzae	46.46	7.00e-89	319.00
IUUC-Ate-010374	Aspergillus terreus	43.00	7.00e-76	276.00
IUUC-Ame-010728	Astyanax mexicanus	58.26	6.00e-114	402.00
IUUC-Bgr-012297	Blumeria graminis	45.02	3.00e-66	244.00
IUUC-Bta-012433	Bos taurus	62.09	2.00e-116	411.00
IUUC-Bci-013763	Botrytis cinerea	42.69	2.00e-86	311.00
IUUC-Bdi-014490	Brachypodium distachyon	76.85	6.00e-161	559.00
IUUC-Bol-015154	Brassica oleracea	88.34	0.00e+00	639.00
IUUC-Bra-017219	Brassica rapa	91.25	0.00e+00	659.00
IUUC-Cel-018512	Caenorhabditis elegans	50.79	8.00e-102	362.00
IUUC-Cja-019308	Callithrix jacchus	62.09	2.00e-116	411.00
IUUC-Cfa-020998	Canis familiaris	62.09	3.00e-116	410.00
IUUC-Cpo-021580	Cavia porcellus	62.09	1.00e-116	412.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	56.39	6.00e-118	416.00
IUUC-Csa-023456	Chlorocebus sabaeus	62.09	3.00e-116	410.00
IUUC-Cho-024644	Choloepus hoffmanni	61.81	9.00e-117	412.00
IUUC-Cin-025463	Ciona intestinalis	53.73	1.00e-110	392.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	46.25	1.00e-88	319.00
IUUC-Cne-026780	Cryptococcus neoformans	39.56	4.00e-62	231.00
IUUC-Dre-027671	Danio rerio	59.55	4.00e-120	423.00
IUUC-Dno-029769	Dasypus novemcinctus	61.81	1.00e-116	411.00
IUUC-Dse-031316	Dothistroma septosporum	44.41	5.00e-81	293.00
IUUC-Dme-031756	Drosophila melanogaster	53.87	1.00e-106	378.00
IUUC-Ete-032753	Echinops telfairi	57.19	6.00e-98	350.00
IUUC-Eca-033979	Equus caballus	62.09	2.00e-116	411.00
IUUC-Eeu-034862	Erinaceus europaeus	67.39	3.00e-51	194.00
IUUC-Fca-036110	Felis catus	60.70	2.00e-93	334.00
IUUC-Fal-037648	Ficedula albicollis	61.09	2.00e-116	411.00
IUUC-Fox-037861	Fusarium oxysporum	43.65	8.00e-84	303.00
IUUC-Fso-038405	Fusarium solani	44.30	4.00e-85	307.00
IUUC-Gmo-039383	Gadus morhua	56.89	4.00e-114	403.00
IUUC-Ggr-040082	Gaeumannomyces graminis	43.65	9.00e-79	286.00
IUUC-Gga-040785	Gallus gallus	60.97	7.00e-116	409.00
IUUC-Gac-041645	Gasterosteus aculeatus	59.22	9.00e-112	395.00
IUUC-Gma-044329	Glycine max	85.51	0.00e+00	639.00
IUUC-Ggo-044800	Gorilla gorilla	56.27	9.00e-94	336.00
IUUC-Hsa-045918	Homo sapiens	62.09	3.00e-116	410.00
IUUC-Hvu-047342	Hordeum vulgare	77.29	2.00e-161	561.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	57.74	9.00e-60	222.00
IUUC-Kpa-049149	Komagataella pastoris	31.63	6.00e-35	140.00
IUUC-Lch-050395	Latimeria chalumnae	61.49	1.00e-123	435.00
IUUC-Lpe-051275	Leersia perrieri	77.15	9.00e-164	569.00
IUUC-Loc-052666	Lepisosteus oculatus	59.19	1.00e-110	392.00
IUUC-Lma-053129	Leptosphaeria maculans	44.26	2.00e-83	301.00
IUUC-Laf-054512	Loxodonta africana	62.09	2.00e-116	411.00
IUUC-Mcc-055819	Macaca mulatta	62.09	3.00e-116	410.00
IUUC-Meu-056350	Macropus eugenii	56.21	1.00e-98	352.00
IUUC-Mor-057063	Magnaporthe oryzae	45.28	3.00e-83	300.00
IUUC-Mpo-057369	Magnaporthe poae	42.67	1.00e-76	279.00
IUUC-Mtr-058228	Medicago truncatula	83.19	3.00e-180	623.00
IUUC-Mla-059093	Melampsora laricipopulina	41.38	4.00e-65	241.00
IUUC-Mga-059719	Meleagris gallopavo	61.09	2.00e-116	411.00
IUUC-Mvi-060285	Microbotryum violaceum	36.39	8.00e-55	206.00
IUUC-Mmr-061685	Microcebus murinus	58.17	3.00e-102	364.00
IUUC-Mdo-062121	Monodelphis domestica	61.76	8.00e-116	409.00
IUUC-Mmu-063216	Mus musculus	61.49	3.00e-116	410.00
IUUC-Mac-065463	Musa acuminata	74.12	5.00e-154	536.00
IUUC-Mpu-066390	Mustela putorius furo	61.81	1.00e-116	412.00
IUUC-Mlu-066932	Myotis lucifugus	61.86	2.00e-110	392.00
IUUC-Nfi-068509	Neosartorya fischeri	45.37	5.00e-88	317.00
IUUC-Ncr-068870	Neurospora crassa	47.88	4.00e-88	317.00
IUUC-Nle-069539	Nomascus leucogenys	62.09	4.00e-116	410.00
IUUC-Opr-070555	Ochotona princeps	53.92	1.00e-102	365.00
IUUC-Ont-071490	Oreochromis niloticus	56.60	5.00e-113	400.00
IUUC-Oan-073044	Ornithorhynchus anatinus	55.73	1.00e-94	339.00
IUUC-Ocu-073764	Oryctolagus cuniculus	61.81	1.00e-116	412.00
IUUC-Oba-075704	Oryza barthii	77.91	1.00e-160	558.00
IUUC-Obr-076455	Oryza brachyantha	77.74	5.00e-163	566.00
IUUC-Ogl-077382	Oryza glaberrima	77.74	2.00e-163	567.00
IUUC-Ogu-078739	Oryza glumaepatula	78.22	1.00e-160	558.00
IUUC-Oin-079072	Oryza indica	78.22	1.00e-160	558.00
IUUC-Olo-080809	Oryza longistaminata	78.22	1.00e-160	558.00
IUUC-Ome-081677	Oryza meridionalis	77.91	8.00e-160	555.00
IUUC-Oni-082937	Oryza nivara	78.22	1.00e-160	558.00
IUUC-Opu-083510	Oryza punctata	78.22	1.00e-160	558.00
IUUC-Oru-084360	Oryza rufipogon	77.74	3.00e-163	567.00
IUUC-Osa-085640	Oryza sativa	77.74	2.00e-163	567.00
IUUC-Ola-086504	Oryzias latipes	60.52	2.00e-113	401.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.78	2.00e-66	244.00
IUUC-Oga-088773	Otolemur garnettii	62.09	1.00e-116	412.00
IUUC-Oar-089677	Ovis aries	61.49	5.00e-115	406.00
IUUC-Ptr-090724	Pan troglodytes	61.99	2.00e-110	391.00
IUUC-Pan-092683	Papio anubis	62.09	3.00e-116	410.00
IUUC-Psi-093415	Pelodiscus sinensis	61.44	8.00e-116	409.00
IUUC-Pma-094562	Petromyzon marinus	57.72	3.00e-119	421.00
IUUC-Pno-095014	Phaeosphaeria nodorum	44.66	1.00e-83	303.00
IUUC-Ppa-095728	Physcomitrella patens	79.29	2.00e-153	534.00
IUUC-Pfo-096579	Poecilia formosa	60.84	5.00e-114	403.00
IUUC-Pab-098313	Pongo abelii	62.09	3.00e-116	410.00
IUUC-Pop-099747	Populus trichocarpa	85.51	0.00e+00	645.00
IUUC-Pca-100871	Procavia capensis	53.41	4.00e-84	303.00
IUUC-Ppe-101389	Prunus persica	84.06	3.00e-177	613.00
IUUC-Pva-102468	Pteropus vampyrus	50.33	1.00e-84	306.00
IUUC-Pgr-103523	Puccinia graminis	40.75	2.00e-69	255.00
IUUC-Ptt-103930	Puccinia triticina	40.75	2.00e-69	255.00
IUUC-Pte-104299	Pyrenophora teres	44.75	1.00e-88	319.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	45.06	1.00e-89	322.00
IUUC-Rno-105796	Rattus norvegicus	61.81	3.00e-116	410.00
IUUC-Sha-107191	Sarcophilus harrisii	61.76	8.00e-116	409.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.72	7.00e-63	233.00
IUUC-Spo-108249	Schizosaccharomyces pombe	43.79	2.00e-76	278.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	44.95	1.00e-85	308.00
IUUC-Sit-110805	Setaria italica	78.04	2.00e-163	567.00
IUUC-Sly-111567	Solanum lycopersicum	84.97	3.00e-170	589.00
IUUC-Stu-112562	Solanum tuberosum	83.82	7.00e-176	608.00
IUUC-Sar-112991	Sorex araneus	63.30	4.00e-83	300.00
IUUC-Sbi-114010	Sorghum bicolor	78.64	1.00e-163	568.00
IUUC-Sre-114947	Sporisorium reilianum	40.68	3.00e-70	258.00
IUUC-Ssc-115371	Sus scrofa	62.09	2.00e-116	411.00
IUUC-Tgu-117429	Taeniopygia guttata	61.11	5.00e-117	413.00
IUUC-Tru-118081	Takifugu rubripes	60.84	5.00e-114	403.00
IUUC-Tsy-119101	Tarsius syrichta	54.25	7.00e-94	336.00
IUUC-Tni-120532	Tetraodon nigroviridis	60.19	2.00e-113	400.00
IUUC-Tca-121373	Theobroma cacao	86.88	0.00e+00	642.00
IUUC-Tre-122050	Trichoderma reesei	46.25	9.00e-86	309.00
IUUC-Tvi-122394	Trichoderma virens	44.97	1.00e-81	296.00
IUUC-Tae-124661	Triticum aestivum	77.06	2.00e-160	557.00
IUUC-Tme-126998	Tuber melanosporum	50.65	7.00e-91	326.00
IUUC-Tbe-128032	Tupaia belangeri	62.09	3.00e-116	410.00
IUUC-Ttr-129102	Tursiops truncatus	53.59	3.00e-93	334.00
IUUC-Uma-129363	Ustilago maydis	42.24	6.00e-73	266.00
IUUC-Vda-129891	Verticillium dahliae	46.91	2.00e-86	311.00
IUUC-Vpa-130827	Vicugna pacos	62.09	2.00e-116	411.00
IUUC-Vvi-131202	Vitis vinifera	84.01	4.00e-180	623.00
IUUC-Xtr-132769	Xenopus tropicalis	59.74	2.00e-108	384.00
IUUC-Xma-133147	Xiphophorus maculatus	60.52	1.00e-113	402.00
IUUC-Yli-134352	Yarrowia lipolytica	30.31	4.00e-27	114.00
IUUC-Zma-135294	Zea mays	79.14	2.00e-162	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence