iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099747

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_574420; POPTR_0019s12680g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s12680	POPTR_0019s12680.1	POPTR_0019s12680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.70e-39	131.3	96	134
UBD/Beta-Prp	1.20e-61	209.6	51	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v +l++  d   ++s+s D+t++ WD+ tg+++k
   Q: 96   GHKNAVLDLHWtADgSQIISASPDKTVRAWDVETGKQIK 134
           8***********55589******************9976 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghd 137
           l gh+++++++kf+p g+++++gs D+ i +w +   +k +++++gh++ vl+l++ ++g+ ++s+s d+t+r wd+etg+ ++   ++h+
   Q: 51   LTGHQSAIYTMKFNPAGNVIASGSHDKEIFLWYMHgECKNFMVMRGHKNAVLDLHWTADGSQIISASPDKTVRAWDVETGKQIK-KMAEHS 140
           789*****************************6665999*********************************************.99**** PP
   S: 138  gvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
           ++vn+ + +  g  l+vsGs+D+t +lWdl+++  ++t+   ++ +++ +sf++ +  + +g+ d++vk+wd+++ge+ +tl+gh+d ++s
   Q: 141  SFVNSCCPSRRGpPLVVSGSDDGTSKLWDLRQKGAIQTFP--DKYQITAVSFSDASDKIFTGGIDNDVKVWDIRKGEVTMTLEGHQDMITS 229
           ***************************************5..8************************************************ PP
   S: 228  vrfspnderlvsgssDgsiriWdlr....sgdllktlqlhnss 266
           +++sp++ +l++ ++D+ + iWd+r    ++ ++k +++h+++
   Q: 230  MQLSPDGSYLLTNGMDNKLCIWDMRpyapQNRCVKIFEGHQHN 272
           **********************998555567888888888876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQVVPRESES ALSVSGPRPM EWSTVPYTGS QGPGHNGKQR RSSLESPIML LTGHQSAIYT 60
MKFNPAGNVI ASGSHDKEIF LWYMHGECKN FMVMRGHKNA VLDLHWTADG SQIISASPDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGCTCAT AAAGAATAGA TCGCCTCCAT TCCAGGCCAG GGTTTAGCAG AGAGAAGAGA 60
AATCTCTCAC CATCATCACA AGGTACTCTC CTCTCTTGTT CTCGCTCTCA AAGCTCTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0019s12680g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	79.94	7.00e-166	575.00
IUUC-Aml-001428	Ailuropoda melanoleuca	61.51	4.00e-111	393.00
IUUC-Atr-003164	Amborella trichopoda	80.60	2.00e-167	581.00
IUUC-Apl-003447	Anas platyrhynchos	62.68	4.00e-110	390.00
IUUC-Aca-004270	Anolis carolinensis	59.09	4.00e-113	400.00
IUUC-Aly-005659	Arabidopsis lyrata	85.80	0.00e+00	647.00
IUUC-Ath-006764	Arabidopsis thaliana	85.51	0.00e+00	645.00
IUUC-Acl-008324	Aspergillus clavatus	47.88	5.00e-89	320.00
IUUC-Afl-008607	Aspergillus flavus	47.65	1.00e-85	309.00
IUUC-Afu-008998	Aspergillus fumigatus	47.56	3.00e-89	321.00
IUUC-Ani-009363	Aspergillus nidulans	45.68	9.00e-90	323.00
IUUC-Ang-009513	Aspergillus niger	45.51	2.00e-80	292.00
IUUC-Aor-010237	Aspergillus oryzae	48.21	1.00e-89	322.00
IUUC-Ate-010374	Aspergillus terreus	47.94	2.00e-77	281.00
IUUC-Ame-010728	Astyanax mexicanus	59.22	3.00e-113	401.00
IUUC-Bgr-012297	Blumeria graminis	44.28	8.00e-66	243.00
IUUC-Bta-012433	Bos taurus	61.76	3.00e-117	414.00
IUUC-Bci-013763	Botrytis cinerea	44.95	1.00e-85	309.00
IUUC-Bdi-014490	Brachypodium distachyon	78.04	4.00e-163	566.00
IUUC-Bol-015154	Brassica oleracea	83.19	2.00e-178	617.00
IUUC-Bra-017008	Brassica rapa	83.19	1.00e-178	617.00
IUUC-Cel-018512	Caenorhabditis elegans	51.27	3.00e-102	364.00
IUUC-Cja-019308	Callithrix jacchus	61.76	3.00e-117	414.00
IUUC-Cfa-020998	Canis familiaris	61.76	3.00e-117	414.00
IUUC-Cpo-021580	Cavia porcellus	61.76	2.00e-117	414.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	56.07	3.00e-115	407.00
IUUC-Csa-023456	Chlorocebus sabaeus	61.76	4.00e-117	414.00
IUUC-Cho-024644	Choloepus hoffmanni	61.49	6.00e-118	416.00
IUUC-Cin-025463	Ciona intestinalis	55.19	7.00e-112	396.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	45.93	2.00e-87	315.00
IUUC-Cne-026780	Cryptococcus neoformans	37.54	8.00e-60	223.00
IUUC-Dre-027671	Danio rerio	58.58	4.00e-119	420.00
IUUC-Dno-029769	Dasypus novemcinctus	61.49	1.00e-117	415.00
IUUC-Dse-031316	Dothistroma septosporum	42.76	1.00e-79	288.00
IUUC-Dme-031756	Drosophila melanogaster	54.52	1.00e-105	375.00
IUUC-Ete-032753	Echinops telfairi	56.54	3.00e-98	351.00
IUUC-Eca-033979	Equus caballus	61.76	3.00e-117	414.00
IUUC-Eeu-034862	Erinaceus europaeus	68.84	2.00e-53	202.00
IUUC-Fca-036110	Felis catus	58.75	4.00e-92	330.00
IUUC-Fal-037648	Ficedula albicollis	59.82	1.00e-117	415.00
IUUC-Fox-037861	Fusarium oxysporum	42.67	3.00e-82	297.00
IUUC-Fso-038405	Fusarium solani	43.32	1.00e-83	302.00
IUUC-Gmo-039383	Gadus morhua	56.18	5.00e-115	407.00
IUUC-Ggr-040082	Gaeumannomyces graminis	43.97	1.00e-78	285.00
IUUC-Gga-040785	Gallus gallus	61.41	5.00e-118	417.00
IUUC-Gac-041645	Gasterosteus aculeatus	60.19	5.00e-113	400.00
IUUC-Gma-043672	Glycine max	88.12	0.00e+00	655.00
IUUC-Ggo-044800	Gorilla gorilla	56.95	4.00e-96	344.00
IUUC-Hsa-045918	Homo sapiens	61.76	4.00e-117	414.00
IUUC-Hvu-047342	Hordeum vulgare	79.65	5.00e-165	573.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	55.95	3.00e-58	217.00
IUUC-Kpa-049149	Komagataella pastoris	31.05	2.00e-35	142.00
IUUC-Lch-050395	Latimeria chalumnae	61.09	7.00e-124	436.00
IUUC-Lpe-051275	Leersia perrieri	77.17	1.00e-166	578.00
IUUC-Loc-052666	Lepisosteus oculatus	57.40	3.00e-112	397.00
IUUC-Lma-053129	Leptosphaeria maculans	43.93	1.00e-84	306.00
IUUC-Laf-054512	Loxodonta africana	61.76	2.00e-117	414.00
IUUC-Mcc-055819	Macaca mulatta	61.76	5.00e-117	413.00
IUUC-Meu-056350	Macropus eugenii	57.52	2.00e-101	362.00
IUUC-Mor-057063	Magnaporthe oryzae	44.63	2.00e-82	298.00
IUUC-Mpo-057369	Magnaporthe poae	43.97	5.00e-78	284.00
IUUC-Mtr-058228	Medicago truncatula	86.09	0.00e+00	640.00
IUUC-Mla-059093	Melampsora laricipopulina	40.62	8.00e-65	240.00
IUUC-Mga-059719	Meleagris gallopavo	61.81	9.00e-118	416.00
IUUC-Mvi-060285	Microbotryum violaceum	37.42	1.00e-55	209.00
IUUC-Mmr-061685	Microcebus murinus	57.52	2.00e-102	365.00
IUUC-Mdo-062121	Monodelphis domestica	62.09	6.00e-117	413.00
IUUC-Mmu-063216	Mus musculus	60.84	4.00e-117	414.00
IUUC-Mac-065463	Musa acuminata	78.53	1.00e-159	555.00
IUUC-Mpu-066390	Mustela putorius furo	61.49	1.00e-117	415.00
IUUC-Mlu-066932	Myotis lucifugus	61.51	4.00e-111	394.00
IUUC-Nfi-068509	Neosartorya fischeri	47.23	7.00e-89	320.00
IUUC-Ncr-068870	Neurospora crassa	46.08	6.00e-88	317.00
IUUC-Nle-069539	Nomascus leucogenys	61.76	5.00e-117	413.00
IUUC-Opr-070555	Ochotona princeps	54.58	1.00e-103	369.00
IUUC-Ont-071490	Oreochromis niloticus	55.43	1.00e-112	398.00
IUUC-Oan-073044	Ornithorhynchus anatinus	55.97	5.00e-97	347.00
IUUC-Ocu-073764	Oryctolagus cuniculus	61.49	1.00e-117	416.00
IUUC-Oba-075704	Oryza barthii	80.37	2.00e-163	567.00
IUUC-Obr-076455	Oryza brachyantha	79.29	2.00e-165	574.00
IUUC-Ogl-077382	Oryza glaberrima	78.93	4.00e-165	573.00
IUUC-Ogu-078739	Oryza glumaepatula	80.67	1.00e-163	568.00
IUUC-Oin-079072	Oryza indica	80.67	1.00e-163	568.00
IUUC-Olo-080809	Oryza longistaminata	80.67	1.00e-163	568.00
IUUC-Ome-081677	Oryza meridionalis	80.37	2.00e-162	563.00
IUUC-Oni-082937	Oryza nivara	80.67	1.00e-163	568.00
IUUC-Opu-083510	Oryza punctata	80.67	1.00e-163	568.00
IUUC-Oru-084360	Oryza rufipogon	79.53	2.00e-165	575.00
IUUC-Osa-085640	Oryza sativa	79.53	1.00e-165	575.00
IUUC-Ola-086504	Oryzias latipes	56.81	8.00e-115	406.00
IUUC-Olu-087869	Ostreococcus lucimarinus	40.59	8.00e-66	243.00
IUUC-Oga-088773	Otolemur garnettii	61.76	2.00e-117	414.00
IUUC-Oar-089677	Ovis aries	61.17	1.00e-115	409.00
IUUC-Ptr-090724	Pan troglodytes	61.30	5.00e-111	393.00
IUUC-Pan-092683	Papio anubis	61.76	4.00e-117	414.00
IUUC-Psi-093415	Pelodiscus sinensis	61.76	6.00e-117	413.00
IUUC-Pma-094562	Petromyzon marinus	60.19	2.00e-120	424.00
IUUC-Pno-095014	Phaeosphaeria nodorum	47.25	5.00e-86	310.00
IUUC-Ppa-095728	Physcomitrella patens	71.26	1.00e-152	531.00
IUUC-Pfo-096579	Poecilia formosa	60.84	5.00e-114	403.00
IUUC-Pab-098313	Pongo abelii	61.76	4.00e-117	414.00
IUUC-Pca-100871	Procavia capensis	53.05	5.00e-85	306.00
IUUC-Ppe-101389	Prunus persica	85.51	4.00e-180	623.00
IUUC-Pva-102468	Pteropus vampyrus	49.67	6.00e-85	306.00
IUUC-Pgr-103523	Puccinia graminis	39.69	2.00e-69	255.00
IUUC-Ptt-103930	Puccinia triticina	39.81	3.00e-69	254.00
IUUC-Pte-104299	Pyrenophora teres	48.21	3.00e-90	324.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	47.42	1.00e-90	325.00
IUUC-Rno-105796	Rattus norvegicus	61.49	3.00e-117	414.00
IUUC-Sha-107191	Sarcophilus harrisii	62.09	6.00e-117	413.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	38.38	5.00e-63	233.00
IUUC-Spo-108249	Schizosaccharomyces pombe	42.67	7.00e-75	273.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	44.30	5.00e-85	307.00
IUUC-Sit-110805	Setaria italica	80.42	1.00e-166	578.00
IUUC-Sly-111567	Solanum lycopersicum	83.74	4.00e-168	583.00
IUUC-Stu-112562	Solanum tuberosum	84.07	3.00e-176	610.00
IUUC-Sar-112991	Sorex araneus	66.06	1.00e-86	311.00
IUUC-Sbi-114010	Sorghum bicolor	80.71	1.00e-166	578.00
IUUC-Sre-114947	Sporisorium reilianum	41.93	8.00e-71	259.00
IUUC-Ssc-115371	Sus scrofa	61.76	3.00e-117	414.00
IUUC-Tgu-117429	Taeniopygia guttata	61.44	2.00e-117	414.00
IUUC-Tru-118081	Takifugu rubripes	59.81	1.00e-113	402.00
IUUC-Tsy-119101	Tarsius syrichta	52.94	7.00e-94	336.00
IUUC-Tni-120532	Tetraodon nigroviridis	59.55	4.00e-113	400.00
IUUC-Tca-121373	Theobroma cacao	88.41	0.00e+00	645.00
IUUC-Tre-122050	Trichoderma reesei	46.58	2.00e-85	308.00
IUUC-Tvi-122394	Trichoderma virens	44.97	4.00e-81	294.00
IUUC-Tae-124661	Triticum aestivum	79.41	1.00e-163	568.00
IUUC-Tme-126998	Tuber melanosporum	49.03	7.00e-88	316.00
IUUC-Tbe-128032	Tupaia belangeri	61.76	3.00e-117	414.00
IUUC-Ttr-129102	Tursiops truncatus	51.96	6.00e-92	330.00
IUUC-Uma-129363	Ustilago maydis	41.61	5.00e-72	264.00
IUUC-Vda-129891	Verticillium dahliae	44.95	7.00e-84	303.00
IUUC-Vpa-130827	Vicugna pacos	61.76	3.00e-117	414.00
IUUC-Vvi-131202	Vitis vinifera	87.57	0.00e+00	640.00
IUUC-Xtr-132769	Xenopus tropicalis	58.42	2.00e-108	384.00
IUUC-Xma-133147	Xiphophorus maculatus	60.52	1.00e-113	402.00
IUUC-Zma-135294	Zea mays	81.60	3.00e-165	573.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence