iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099708

Ensembl Protein ID

POPTR_0003s04070.1

UniProt Accession

B9GVE0; B9GVE0_POPTR

Genbank Protein ID

EEE78195.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_830643; POPTR_0003s04070g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s04070	POPTR_0003s04070.1	POPTR_0003s04070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.50e-08	35.8	200	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
            C  Cge++ +++  ++C++C++wfH +C+k++   + +  +++ Cp+C+
   Q: 200  TCGACGESYGTDEFWICCDICEKWFHGKCVKIT-PAKAEHIKQYKCPSCS 248
           79***********99******************.888888888******7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEAIPHPIPR TVEEVFSDFK GRRSGLIKAL TTDVEKFYQQ CDPDKENLCL YGLPNETWEV 60
NLPVEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDS WLLAVAFYFG ARFGFGKNER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAGAGTC CGTCTATCTT CGCCCACAAA TTATATCGGA AAAAATTAAG ACAGGGAAAC 60
GAAAACGAGA GAGCAGGGAA CTCTATGAGT ATGAGGAACA AGCAAAATTC CCATTAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

pop:POPTR_0003s04070g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005868	Arabidopsis lyrata	79.03	1.00e-96	345.00
IUUC-Ath-007447	Arabidopsis thaliana	79.84	7.00e-97	345.00
IUUC-Acl-008106	Aspergillus clavatus	48.78	3.00e-06	47.00
IUUC-Afu-008783	Aspergillus fumigatus	51.22	7.00e-07	49.30
IUUC-Bol-015206	Brassica oleracea	77.47	2.00e-94	337.00
IUUC-Bra-016659	Brassica rapa	77.87	5.00e-95	339.00
IUUC-Csv-026156	Ciona savignyi	50.00	6.00e-08	51.60
IUUC-Kpa-049384	Komagataella pastoris	41.67	5.00e-07	48.90
IUUC-Nfi-068438	Neosartorya fischeri	51.22	7.00e-07	48.90
IUUC-Opu-083864	Oryza punctata	61.20	1.00e-66	245.00
IUUC-Olu-087829	Ostreococcus lucimarinus	70.23	4.00e-43	167.00
IUUC-Sly-111474	Solanum lycopersicum	81.10	1.00e-96	345.00
IUUC-Stu-112822	Solanum tuberosum	78.97	5.00e-97	346.00
IUUC-Sre-115149	Sporisorium reilianum	51.43	2.00e-06	47.00
IUUC-Tca-121742	Theobroma cacao	85.04	1.00e-99	355.00
IUUC-Tvi-122269	Trichoderma virens	47.50	5.00e-05	41.60
IUUC-Uma-129637	Ustilago maydis	48.48	6.00e-06	45.80
IUUC-Vvi-131388	Vitis vinifera	84.71	1.00e-100	358.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence