iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098833

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTR_0013s09710g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s09710	POPTR_0013s09710.1	POPTR_0013s09710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	33.0	114	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +  + l CgH+fh +Cl  w        ++ +CP+Cr
   Q: 114  CIICREEMTT-AKKLICGHLFHVHCLRSW------LERQHTCPTCR 152
           ********99.89999*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

YMILATTTVS TFVKYVFYVS DMLMEGQWER KPVYTFYMEL VRDLLHLSMY LCFFLVIFMN 60
YGVPLHLIRE LYETFRNFKI RVADYIRYRK ITSNMNDRFP DATAEELNAS DATCIICREE 120

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Nucleotide Sequence
(Fasta)

TACATGATAC TGGCGACAAC AACTGTGTCA ACATTTGTAA AATATGTTTT CTATGTGAGT 60
GACATGCTTA TGGAAGGACA ATGGGAAAGA AAGCCTGTCT ACACCTTCTA CATGGAACTT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0044322--C:endoplasmic reticulum quality control compartment
GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:1990381--F:ubiquitin-specific protease binding
GO:0051082--F:unfolded protein binding
GO:0008270--F:zinc ion binding
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

pop:POPTR_0013s09710g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007894	Ashbya gossypii	33.87	2.00e-15	77.00
IUUC-Tre-122204	Trichoderma reesei	42.45	6.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence