iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058565

Ensembl Protein ID

KEH38928

UniProt Accession

A0A072VBZ8; A0A072VBZ8_MEDTR

Genbank Protein ID

KEH38928.1

Protein Name

DNA/RNA helicase

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g084630

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g084630	KEH38928	KEH38928
MTR_2g084630	KEH38927	KEH38927

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-07	32.5	781	821

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++Cl   w       s++ +CP+Cr
   Q: 781  CPICLEAFED-SVLTPCAHRLCRECLlASW-----RNSTSGLCPVCR 821
           **********.888***********98999.....5788888****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGSKVTDPNL STVRSIVGSE FTDMEIIRAL HLAKNDVTSA INIIFDTQRV SLPKSTPRAS 60
NTQRGSPPNS TPRAVVPGAV TATATSKSNA NAENNKCSVE LESKDWWFVG SGEVAGLSTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACTGAGAA ATTTTTAGGG TTAGGGTTTC AATGGGGAGC AAGGTCACCG ACCCCAATCT 60
CTCCACCGTC CGATCCATCG TCGGTTCCGA ATTCACCGAC ATGGAAATCA TCAGAGCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0004386--F:helicase activity
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003139	Amborella trichopoda	65.00	0.00e+00	1362.00
IUUC-Aly-006331	Arabidopsis lyrata	67.75	0.00e+00	1398.00
IUUC-Ath-007517	Arabidopsis thaliana	68.33	0.00e+00	1413.00
IUUC-Acl-008022	Aspergillus clavatus	29.69	5.00e-131	461.00
IUUC-Afl-008514	Aspergillus flavus	29.68	2.00e-126	446.00
IUUC-Afu-009055	Aspergillus fumigatus	30.73	2.00e-129	456.00
IUUC-Ani-009340	Aspergillus nidulans	29.00	5.00e-119	422.00
IUUC-Ang-009785	Aspergillus niger	30.57	2.00e-127	450.00
IUUC-Aor-010158	Aspergillus oryzae	29.68	5.00e-126	445.00
IUUC-Ate-010536	Aspergillus terreus	29.38	1.00e-112	400.00
IUUC-Bci-013741	Botrytis cinerea	31.60	5.00e-133	468.00
IUUC-Bdi-014646	Brachypodium distachyon	62.18	0.00e+00	1259.00
IUUC-Bol-015484	Brassica oleracea	66.86	0.00e+00	1362.00
IUUC-Bra-016925	Brassica rapa	67.21	0.00e+00	1377.00
IUUC-Csv-026168	Ciona savignyi	27.78	1.00e-61	230.00
IUUC-Cne-026886	Cryptococcus neoformans	31.82	4.00e-128	452.00
IUUC-Cme-027110	Cyanidioschyzon merolae	36.55	6.00e-125	441.00
IUUC-Dse-031471	Dothistroma septosporum	30.39	7.00e-135	474.00
IUUC-Fox-038039	Fusarium oxysporum	35.35	1.00e-125	443.00
IUUC-Fso-038179	Fusarium solani	32.84	9.00e-138	484.00
IUUC-Ggr-039735	Gaeumannomyces graminis	31.65	3.00e-126	446.00
IUUC-Gma-042995	Glycine max	80.88	0.00e+00	1702.00
IUUC-Hvu-047495	Hordeum vulgare	64.94	0.00e+00	1052.00
IUUC-Kpa-049087	Komagataella pastoris	30.49	4.00e-104	372.00
IUUC-Lpe-051584	Leersia perrieri	60.18	0.00e+00	1161.00
IUUC-Lma-052956	Leptosphaeria maculans	30.32	3.00e-124	439.00
IUUC-Mor-057210	Magnaporthe oryzae	32.60	3.00e-132	466.00
IUUC-Mpo-057407	Magnaporthe poae	31.95	4.00e-133	468.00
IUUC-Mvi-060322	Microbotryum violaceum	32.74	3.00e-92	333.00
IUUC-Nfi-068354	Neosartorya fischeri	30.53	2.00e-130	459.00
IUUC-Ncr-068844	Neurospora crassa	31.06	8.00e-131	461.00
IUUC-Oba-075937	Oryza barthii	63.44	0.00e+00	1143.00
IUUC-Obr-076403	Oryza brachyantha	67.24	0.00e+00	1204.00
IUUC-Ogl-077573	Oryza glaberrima	63.29	0.00e+00	1282.00
IUUC-Ogu-077957	Oryza glumaepatula	59.86	0.00e+00	1166.00
IUUC-Oin-079146	Oryza indica	67.10	0.00e+00	1247.00
IUUC-Olo-080437	Oryza longistaminata	56.50	0.00e+00	988.00
IUUC-Ome-081448	Oryza meridionalis	61.29	0.00e+00	1207.00
IUUC-Oni-082389	Oryza nivara	63.02	0.00e+00	1131.00
IUUC-Opu-083322	Oryza punctata	60.74	0.00e+00	1181.00
IUUC-Oru-085066	Oryza rufipogon	60.02	0.00e+00	1169.00
IUUC-Osa-085686	Oryza sativa	68.57	0.00e+00	1136.00
IUUC-Pan-091844	Papio anubis	33.98	2.00e-49	190.00
IUUC-Pno-094916	Phaeosphaeria nodorum	32.30	8.00e-129	454.00
IUUC-Ppa-095877	Physcomitrella patens	55.57	0.00e+00	1046.00
IUUC-Pop-099320	Populus trichocarpa	68.95	0.00e+00	1427.00
IUUC-Ppe-101820	Prunus persica	70.33	0.00e+00	1434.00
IUUC-Pgr-103454	Puccinia graminis	27.54	3.00e-102	366.00
IUUC-Ptt-103829	Puccinia triticina	26.36	1.00e-88	321.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	30.65	2.00e-121	429.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	33.26	5.00e-129	455.00
IUUC-Spo-108026	Schizosaccharomyces pombe	33.10	5.00e-131	461.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	31.74	1.00e-134	473.00
IUUC-Smo-108977	Selaginella moellendorffii	64.57	1.00e-146	511.00
IUUC-Sit-110076	Setaria italica	62.37	0.00e+00	1240.00
IUUC-Sly-111908	Solanum lycopersicum	66.57	0.00e+00	1396.00
IUUC-Sbi-113927	Sorghum bicolor	62.24	0.00e+00	1243.00
IUUC-Tca-121137	Theobroma cacao	72.13	0.00e+00	1504.00
IUUC-Tre-121896	Trichoderma reesei	30.21	1.00e-132	467.00
IUUC-Tvi-122597	Trichoderma virens	30.74	6.00e-138	484.00
IUUC-Tae-124722	Triticum aestivum	66.06	0.00e+00	1228.00
IUUC-Tur-126433	Triticum urartu	65.07	0.00e+00	971.00
IUUC-Tme-126953	Tuber melanosporum	31.89	9.00e-126	444.00
IUUC-Tbe-127642	Tupaia belangeri	37.55	1.00e-45	178.00
IUUC-Vda-129849	Verticillium dahliae	33.12	2.00e-111	397.00
IUUC-Vvi-130943	Vitis vinifera	70.06	0.00e+00	1483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence