iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pgr-103479

Ensembl Protein ID

EFP93805

UniProt Accession

E3LB80; EIF3I_PUCGT

Genbank Protein ID

EFP93805.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

DS178410

Gene Name

TIF34; PGTG_19816

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGTG_19816	EFP93805	EFP93805

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-23	81.4	101	139
UBD/Beta-Prp	1.40e-41	142.3	57	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v++++  s   ++vsGs D+++++W ++tg +lk
   Q: 101  GHNGTVWSVDVdSKsEFMVSGSADNSMRLWKVSTGECLK 139
           8**********955699********************97 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee................. 131
           lsghe   t+vk++++g++l ++s+D++i+vw   +g+ + t++gh+ +v+s++++ +++++vsGs+d+  r+w+++tg+cl++                 
   Q: 57   LSGHERSLTQVKYNREGDLLFSCSKDHIINVWFTHNGERLGTYNGHNGTVWSVDVDSKSEFMVSGSADNSMRLWKVSTGECLKAwefptaikrvswseddt 157
           79********************************************************************************99***************** PP
   S: 132  ..................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
                                             ++++  +  ++v++++ ++ l++G+ +++v lWd++tg+ +   +++h + ++ l+++ +++++v+ 
   Q: 158  kialvteqrmghqgavrvfeinrdggpqpdepllVFNPIGSKAQVVAFSSLDKHLITGHENGKVALWDVNTGEEVASKEKNHIGLITDLQMSADRTYFVTS 258
           ***************************************************************************************************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs 241
           s+d++ +l+d +t e+++++++ +++ +s ++ p + +l+ g+
   Q: 259  SKDKSARLYDSRTLEVIKSYQDPQTPLNSAALIPGKPYLLMGG 301
           **************************************99987 PP

Organism

Puccinia graminis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MTCHMIGDTT RVTDCDTSKY FTGVSPPTSC ERPKNFQRTN PACRPRPQHN IMRPILLSGH 60
ERSLTQVKYN REGDLLFSCS KDHIINVWFT HNGERLGTYN GHNGTVWSVD VDSKSEFMVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCTGTC ACATGATCGG TGATACGACA CGTGTGACAG ACTGTGACAC CTCCAAGTAT 60
TTCACCGGGG TCAGTCCTCC CACAAGCTGC GAGCGTCCAA AAAACTTCCA ACGAACCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0002188--P:translation reinitiation

KEGG

pgr:PGTG_19816

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001321	Ailuropoda melanoleuca	47.81	3.00e-84	303.00
IUUC-Atr-002468	Amborella trichopoda	42.11	1.00e-40	157.00
IUUC-Apl-003841	Anas platyrhynchos	47.50	2.00e-85	306.00
IUUC-Aca-005123	Anolis carolinensis	47.35	4.00e-85	305.00
IUUC-Aly-006532	Arabidopsis lyrata	42.68	2.00e-76	277.00
IUUC-Ath-007094	Arabidopsis thaliana	42.38	4.00e-77	280.00
IUUC-Ago-008000	Ashbya gossypii	45.76	3.00e-85	306.00
IUUC-Acl-008098	Aspergillus clavatus	53.49	7.00e-105	372.00
IUUC-Afl-008494	Aspergillus flavus	54.60	2.00e-109	386.00
IUUC-Afu-009080	Aspergillus fumigatus	53.49	3.00e-105	372.00
IUUC-Ani-009230	Aspergillus nidulans	55.59	2.00e-107	380.00
IUUC-Aor-010114	Aspergillus oryzae	54.60	2.00e-109	386.00
IUUC-Ate-010285	Aspergillus terreus	55.88	2.00e-108	383.00
IUUC-Ame-011534	Astyanax mexicanus	47.85	6.00e-86	308.00
IUUC-Bgr-012121	Blumeria graminis	51.23	6.00e-97	345.00
IUUC-Bta-013143	Bos taurus	47.98	7.00e-85	305.00
IUUC-Bci-013950	Botrytis cinerea	55.42	4.00e-108	382.00
IUUC-Bdi-015019	Brachypodium distachyon	43.56	8.00e-79	285.00
IUUC-Bol-015709	Brassica oleracea	40.98	2.00e-73	268.00
IUUC-Bra-017760	Brassica rapa	39.31	5.00e-74	270.00
IUUC-Cel-018226	Caenorhabditis elegans	37.50	7.00e-67	245.00
IUUC-Cja-019741	Callithrix jacchus	47.98	6.00e-85	305.00
IUUC-Cfa-021204	Canis familiaris	47.81	3.00e-84	303.00
IUUC-Cpo-021661	Cavia porcellus	47.50	5.00e-84	302.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	40.49	4.00e-71	259.00
IUUC-Csa-024038	Chlorocebus sabaeus	47.98	6.00e-85	305.00
IUUC-Cin-025597	Ciona intestinalis	44.24	2.00e-87	313.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	54.80	3.00e-103	366.00
IUUC-Cne-026838	Cryptococcus neoformans	54.84	4.00e-113	399.00
IUUC-Cme-027304	Cyanidioschyzon merolae	42.28	3.00e-69	253.00
IUUC-Dre-028567	Danio rerio	47.04	3.00e-85	306.00
IUUC-Dno-029171	Dasypus novemcinctus	45.95	3.00e-84	303.00
IUUC-Dor-030257	Dipodomys ordii	37.06	2.00e-29	121.00
IUUC-Dse-031191	Dothistroma septosporum	55.42	4.00e-100	356.00
IUUC-Dme-031879	Drosophila melanogaster	45.03	6.00e-86	308.00
IUUC-Ete-032336	Echinops telfairi	40.58	5.00e-40	155.00
IUUC-Eca-033259	Equus caballus	47.81	4.00e-84	302.00
IUUC-Eeu-035153	Erinaceus europaeus	41.55	5.00e-24	103.00
IUUC-Fca-036489	Felis catus	47.81	4.00e-84	302.00
IUUC-Fal-037485	Ficedula albicollis	47.50	1.00e-85	307.00
IUUC-Fox-037860	Fusarium oxysporum	51.78	2.00e-102	363.00
IUUC-Fso-038188	Fusarium solani	51.48	1.00e-98	351.00
IUUC-Gmo-039311	Gadus morhua	46.25	7.00e-84	301.00
IUUC-Ggr-040045	Gaeumannomyces graminis	54.18	5.00e-106	375.00
IUUC-Gga-040645	Gallus gallus	46.50	6.00e-84	302.00
IUUC-Gac-042086	Gasterosteus aculeatus	46.42	1.00e-83	301.00
IUUC-Gma-043246	Glycine max	43.87	1.00e-78	285.00
IUUC-Ggo-045578	Gorilla gorilla	47.98	6.00e-85	305.00
IUUC-Hsa-046734	Homo sapiens	47.98	6.00e-85	305.00
IUUC-Hvu-047553	Hordeum vulgare	43.25	1.00e-77	281.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	47.50	7.00e-84	301.00
IUUC-Kpa-049325	Komagataella pastoris	48.61	9.00e-94	335.00
IUUC-Lch-049620	Latimeria chalumnae	46.33	6.00e-76	275.00
IUUC-Lpe-051338	Leersia perrieri	42.63	8.00e-73	265.00
IUUC-Loc-052094	Lepisosteus oculatus	41.98	7.00e-71	258.00
IUUC-Lma-053047	Leptosphaeria maculans	55.86	1.00e-104	371.00
IUUC-Laf-053801	Loxodonta africana	47.30	7.00e-82	295.00
IUUC-Mcc-055498	Macaca mulatta	41.43	2.00e-64	237.00
IUUC-Meu-056729	Macropus eugenii	44.58	5.00e-76	275.00
IUUC-Mor-057025	Magnaporthe oryzae	54.49	3.00e-103	366.00
IUUC-Mpo-057511	Magnaporthe poae	54.80	2.00e-105	373.00
IUUC-Mtr-058051	Medicago truncatula	44.48	5.00e-79	285.00
IUUC-Mla-059061	Melampsora laricipopulina	87.50	0.00e+00	637.00
IUUC-Mga-059229	Meleagris gallopavo	46.89	6.00e-83	298.00
IUUC-Mvi-060399	Microbotryum violaceum	66.47	4.00e-136	475.00
IUUC-Mmr-060764	Microcebus murinus	48.29	1.00e-85	308.00
IUUC-Mdo-062088	Monodelphis domestica	47.83	5.00e-84	302.00
IUUC-Mmu-064304	Mus musculus	47.98	6.00e-85	305.00
IUUC-Mac-065520	Musa acuminata	44.55	2.00e-78	283.00
IUUC-Mpu-066340	Mustela putorius furo	47.81	4.00e-84	302.00
IUUC-Mlu-067111	Myotis lucifugus	47.81	1.00e-84	304.00
IUUC-Nfi-068478	Neosartorya fischeri	53.20	1.00e-104	370.00
IUUC-Ncr-068820	Neurospora crassa	55.11	3.00e-104	369.00
IUUC-Nle-069903	Nomascus leucogenys	47.81	1.00e-84	304.00
IUUC-Opr-070221	Ochotona princeps	46.11	8.00e-81	291.00
IUUC-Ont-071765	Oreochromis niloticus	46.42	5.00e-85	305.00
IUUC-Oan-073660	Ornithorhynchus anatinus	44.48	1.00e-67	247.00
IUUC-Ocu-074039	Oryctolagus cuniculus	47.81	3.00e-84	303.00
IUUC-Oba-075395	Oryza barthii	40.18	1.00e-67	247.00
IUUC-Obr-076334	Oryza brachyantha	41.72	1.00e-72	264.00
IUUC-Ogl-077751	Oryza glaberrima	44.17	8.00e-81	291.00
IUUC-Ogu-078207	Oryza glumaepatula	44.17	8.00e-81	291.00
IUUC-Oin-079878	Oryza indica	44.48	2.00e-81	293.00
IUUC-Olo-080677	Oryza longistaminata	38.16	3.00e-73	266.00
IUUC-Ome-081228	Oryza meridionalis	36.82	3.00e-41	159.00
IUUC-Oni-082411	Oryza nivara	38.96	5.00e-65	239.00
IUUC-Opu-083136	Oryza punctata	43.87	2.00e-80	290.00
IUUC-Oru-084916	Oryza rufipogon	42.99	2.00e-79	287.00
IUUC-Osa-085454	Oryza sativa	44.48	2.00e-81	293.00
IUUC-Ola-087053	Oryzias latipes	47.35	2.00e-85	307.00
IUUC-Olu-087602	Ostreococcus lucimarinus	44.10	1.00e-79	288.00
IUUC-Oga-088154	Otolemur garnettii	47.81	2.00e-84	303.00
IUUC-Oar-089915	Ovis aries	47.81	4.00e-84	302.00
IUUC-Ptr-091124	Pan troglodytes	41.07	6.00e-62	229.00
IUUC-Pan-092035	Papio anubis	47.98	6.00e-85	305.00
IUUC-Psi-094096	Pelodiscus sinensis	45.50	2.00e-47	179.00
IUUC-Pno-094988	Phaeosphaeria nodorum	52.17	2.00e-89	320.00
IUUC-Ppa-095536	Physcomitrella patens	45.09	8.00e-82	295.00
IUUC-Pfo-096101	Poecilia formosa	46.11	2.00e-83	300.00
IUUC-Pab-097726	Pongo abelii	47.98	6.00e-85	305.00
IUUC-Pop-099617	Populus trichocarpa	44.17	1.00e-77	281.00
IUUC-Pca-101014	Procavia capensis	47.98	5.00e-85	305.00
IUUC-Ppe-101320	Prunus persica	44.17	1.00e-77	281.00
IUUC-Pva-102789	Pteropus vampyrus	45.17	3.00e-76	276.00
IUUC-Ptt-103981	Puccinia triticina	96.73	0.00e+00	685.00
IUUC-Pte-104278	Pyrenophora teres	54.63	5.00e-100	355.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	54.63	5.00e-100	355.00
IUUC-Rno-105867	Rattus norvegicus	45.21	2.00e-71	261.00
IUUC-Sce-106251	Saccharomyces cerevisiae	45.62	8.00e-89	318.00
IUUC-Sha-107039	Sarcophilus harrisii	47.83	2.00e-84	303.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	55.52	1.00e-107	380.00
IUUC-Spo-108314	Schizosaccharomyces pombe	56.75	4.00e-109	385.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	55.11	2.00e-107	380.00
IUUC-Smo-108728	Selaginella moellendorffii	43.56	1.00e-78	284.00
IUUC-Sit-110801	Setaria italica	44.48	6.00e-82	295.00
IUUC-Sly-111326	Solanum lycopersicum	44.17	9.00e-80	288.00
IUUC-Stu-112458	Solanum tuberosum	44.79	8.00e-80	288.00
IUUC-Sbi-114063	Sorghum bicolor	43.56	7.00e-80	288.00
IUUC-Sre-115096	Sporisorium reilianum	60.82	6.00e-113	398.00
IUUC-Ssc-116080	Sus scrofa	47.98	6.00e-85	305.00
IUUC-Tgu-116988	Taeniopygia guttata	47.19	4.00e-85	306.00
IUUC-Tru-118766	Takifugu rubripes	47.04	1.00e-84	304.00
IUUC-Tni-120197	Tetraodon nigroviridis	47.04	3.00e-85	306.00
IUUC-Tca-121316	Theobroma cacao	45.40	2.00e-80	290.00
IUUC-Tre-122097	Trichoderma reesei	52.37	5.00e-103	365.00
IUUC-Tvi-122442	Trichoderma virens	52.66	5.00e-103	365.00
IUUC-Tae-125800	Triticum aestivum	42.31	9.00e-78	281.00
IUUC-Tur-126334	Triticum urartu	36.81	5.00e-58	216.00
IUUC-Tme-127038	Tuber melanosporum	55.86	5.00e-109	385.00
IUUC-Ttr-128659	Tursiops truncatus	44.86	1.00e-66	244.00
IUUC-Uma-129464	Ustilago maydis	60.82	9.00e-113	397.00
IUUC-Vda-129841	Verticillium dahliae	54.60	1.00e-105	374.00
IUUC-Vvi-131076	Vitis vinifera	44.17	1.00e-78	285.00
IUUC-Xtr-132395	Xenopus tropicalis	48.29	5.00e-85	305.00
IUUC-Xma-133383	Xiphophorus maculatus	46.11	2.00e-83	300.00
IUUC-Yli-134586	Yarrowia lipolytica	47.69	1.00e-81	294.00
IUUC-Zma-135904	Zea mays	43.56	4.00e-80	289.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence