iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111653

Ensembl Protein ID

Solyc04g005690.2.1

UniProt Accession

K4BNH5; K4BNH5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc04g005690.2	Solyc04g005690.2.1	Solyc04g005690.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	7.70e-09	36.1	697	764

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 9    dgseltlkv.npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksg 75
           +g +l++ v + s+t+a LKeki+++  +p+++q+L  k   L+d+ +La+y++  g t+ l ++++g
   Q: 697  KGQILEITVqSLSETIASLKEKISGEIQLPANKQKLSGKAGFLKDNLSLAYYNVASGETLGLSLRERG 764
           67777888747777***********************9999*******************99988876 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEENEEDNNK GNKVPTSVAT HTRTIGIIYP PPDIRSIVDK TSQFVAKNGP EFEKRIVLNN 60
AGNAKFNFLN ASDPYHAYYQ HRLADARAQN QASGEQPTQP DDNEAAPAPP TADGAEATAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATGTTCT AATAACAATA AGAACAATCG ATCAAATTCT AGGGTTCCAA ATTTCCAATT 60
AGGTCTTATA GTCTCAGAAA TTCACTTAGA GTCCGAGATT CAGAGAGAGT TCTGCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005686--C:U2 snRNP
GO:0071004--C:U2-type prespliceosome
GO:0003723--F:RNA binding
GO:0000389--P:mRNA 3'-splice site recognition
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012204	Blumeria graminis	30.25	1.00e-46	179.00
IUUC-Bci-013842	Botrytis cinerea	34.75	1.00e-35	143.00
IUUC-Cel-018261	Caenorhabditis elegans	36.60	5.00e-63	234.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	51.08	2.00e-30	125.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	38.91	5.00e-39	154.00
IUUC-Cne-026952	Cryptococcus neoformans	35.34	4.00e-39	155.00
IUUC-Gmo-038887	Gadus morhua	44.93	3.00e-61	229.00
IUUC-Gac-042118	Gasterosteus aculeatus	45.61	4.00e-55	208.00
IUUC-Gma-043382	Glycine max	73.09	0.00e+00	945.00
IUUC-Lma-053219	Leptosphaeria maculans	30.08	3.00e-29	122.00
IUUC-Pno-095106	Phaeosphaeria nodorum	28.52	8.00e-22	97.40
IUUC-Pfo-096212	Poecilia formosa	52.63	4.00e-30	125.00
IUUC-Pgr-103503	Puccinia graminis	30.77	1.00e-52	201.00
IUUC-Ptt-103994	Puccinia triticina	31.29	1.00e-47	184.00
IUUC-Pte-104226	Pyrenophora teres	32.25	6.00e-28	117.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	30.54	1.00e-49	189.00
IUUC-Stu-112579	Solanum tuberosum	98.28	0.00e+00	1180.00
IUUC-Sbi-114746	Sorghum bicolor	57.95	2.00e-169	588.00
IUUC-Sre-115196	Sporisorium reilianum	31.37	1.00e-45	177.00
IUUC-Uma-129357	Ustilago maydis	29.98	9.00e-45	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence