iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058290

Ensembl Protein ID

AES94615

UniProt Accession

G7K578; A0A0C3XC80; G7K578_MEDTR

Genbank Protein ID

AES94615.2

Protein Name

Transducin family protein/WD-40 repeat protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g016370

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g016370	AES94615	AES94615

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-48	162.2	428	463
UBD/Beta-Prp	1.10e-66	226.5	391	594

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+c+++ ++  +l+s+sdD+t k+W++++++
   Q: 428  GHQGEVNCIKWdPTgSILASCSDDNTAKIWSMKQDK 463
           8***********77799**************98876 PP

UBD/Beta-Prp

   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.... 192
           s l++++   + +++s s+d +i+v ++ ++  ++ t++gh+g vnc++++p+g++l+s+s+D+t ++W++k++k ++++++ h + +y + ++++g    
   Q: 391  STLDVDWRN-NVSFASSSNDTMIHVCKIGENHPVK-TFAGHQGEVNCIKWDPTGSILASCSDDNTAKIWSMKQDKYIHDFRE-HSKEIYAIRWSPTGpgtn 488
           555666665.7899*********************.*********************************************9.****************** PP
   S: 193  .....kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedsk 288
                  l+s+s+d+tvklwd + g+ +++lngh+d v+ + fspn+e+l+sgs D+si+iW l  g+++kt+++ n  +  v+  + ++ +++++ ++++
   Q: 489  npnkkLVLASASCDSTVKLWDAELGKLIHSLNGHRDRVYTISFSPNGEYLASGSPDKSINIWSLNDGKIIKTYKG-NGGIFEVCW-NKEGDKIAACFSNNT 587
           ***877889*****************************************************************9.445555544.555555555555668 PP
   S: 289  vniwklk 295
           v i++++
   Q: 588  VCILDFR 594
           8888875 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MASITSVELN YLVFRYLQES GFTHSAFVFG NEGGINKCPI DGNLVPPGAL VTFVQKGLQF 60
LEMEANLNNC DADFDEDFSF LQPLDLITKD VHELKKMVNE RRRKRQRGKT KESEKEHDGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGAGTGTA GCCTAGGTGC TAGTAGTTTA GTTAATGACG GTTGTAAAGG CCCTTGAACC 60
TCTTCATCCG GGAATTATAT AGGACTTGCC GCTTACTGCC CTTTTTTCCC ACCCGTGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

mtr:MTR_5g016370

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Pma-094105	Petromyzon marinus	59.12	4.00e-39	154.00
IUUC-Tme-127126	Tuber melanosporum	36.44	6.00e-51	194.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence