iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018560

Ensembl Protein ID

C10B5.1

UniProt Accession

O16318; O16318_CAEEL

Genbank Protein ID

CCD64079.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BX284605

Gene Name

C10B5.1; CELE_C10B5.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00015670	C10B5.1	C10B5.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-07	30.2	278	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDl 30
           H++ ++++ +  ++   ++++ s D t+ +W l
   Q: 278  HSSTISSIIWlpPEqgEIVIATSSDSTVSLWKL 310
           ***********9556588899999*******97 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MIKPPSPIFT FFGIEGGATC SCLNNGQLLV GSQNGMVQAF GLESKIMEHI VYVDEEERRI 60
QSIEISGNDT FVYIRSYAVL QLRKPEMSKS TWKVIRTIEV DHVGFCNFLI LQSQLLFAST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGGTTTAA TTTATAATTT ATCGAGAATT CTTGTTAATA ACGTGCTTAT TTTTTTTCTT 60
TTAATCATTT CATGGTTTTG CTCCAATTTT TTCATACAAT ATCAAATTGT TTCCGATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

cel:CELE_C10B5.1

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogu-078901	Oryza glumaepatula	28.38	4.00e-07	47.40
IUUC-Oni-082185	Oryza nivara	28.38	4.00e-07	47.00
IUUC-Uma-129437	Ustilago maydis	23.50	6.00e-06	43.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence