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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007659
UUCD1 version UUC-ArT-00421
Ensembl Protein ID AT1G80670.1
UniProt Accession Q38942; Q1LYY5; Q9SAJ0; RAE1_ARATH
Genbank Protein ID AAA98915.1; AAF14654.1; AAF14655.1; AEE36435.1; ABF18994.1; AAM65220.1
Protein Name Protein RAE1; RNA export factor 1
Genbank Nucleotide ID U53501; AC011713; AC011713; CP002684; BT025241; AY087683
Gene Name RAE1; At1g80670; F23A5.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G80670 AT1G80670.1 AT1G80670.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAHINTMentha
Post-translational Modifications (PTMs)
UniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-22 79.7 113 151
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H++++ ++a+ ++ +ll++Gs+D+t+k WD+r+++++++
   Q: 113  HEGPIAAMAWiPGmNLLATGSWDKTLKYWDTRQQNPVHT 151
           99*********999*******************999875 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MATFGAPATA NSNPNKSYEV TPSPADSISS LSFSPRADIL VATSWDNQVR CWEISRSGAS 60
LASAPKASIS HDQPVLCSAW KDDGTTVFSG GCDKQAKMWP LLSGGQPVTV AMHEGPIAAM 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007659|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATTCCTTTCC AATTAAAGTC AACATTGGGC CATAATAAGG CCCAAATATT AGGCCCGATA 60
ATGTTTTTCC TTTTTTCGGT ATGAAAATGT TTTAATCCCA GCGTCTGATA AACGCTGCGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007659|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0181--Complete proteome
KW-0509--mRNA transport
KW-0906--Nuclear pore complex
KW-0539--Nucleus
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0811--Translocation
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0005643--C:nuclear pore
GO:0051028--P:mRNA transport
GO:0015031--P:protein transport
KEGG ath:AT1G80670
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000293 Aegilops tauschii 76.16 4.00e-161 560.00
IUUC-Aml-002179 Ailuropoda melanoleuca 51.00 1.00e-95 342.00
IUUC-Atr-002609 Amborella trichopoda 80.06 2.00e-166 577.00
IUUC-Apl-003637 Anas platyrhynchos 49.86 6.00e-94 336.00
IUUC-Aca-005042 Anolis carolinensis 49.86 4.00e-93 334.00
IUUC-Aly-006015 Arabidopsis lyrata 97.99 0.00e+00 717.00
IUUC-Ago-008004 Ashbya gossypii 41.14 3.00e-74 271.00
IUUC-Acl-008030 Aspergillus clavatus 47.20 1.00e-85 309.00
IUUC-Afl-008636 Aspergillus flavus 47.49 2.00e-86 311.00
IUUC-Afu-009121 Aspergillus fumigatus 47.49 2.00e-85 308.00
IUUC-Ani-009238 Aspergillus nidulans 45.95 5.00e-84 303.00
IUUC-Ang-009801 Aspergillus niger 45.22 9.00e-85 306.00
IUUC-Aor-009974 Aspergillus oryzae 47.49 2.00e-86 311.00
IUUC-Ate-010406 Aspergillus terreus 46.90 6.00e-86 310.00
IUUC-Ame-011368 Astyanax mexicanus 50.43 1.00e-94 338.00
IUUC-Bgr-012233 Blumeria graminis 42.42 1.00e-76 279.00
IUUC-Bta-012856 Bos taurus 51.00 1.00e-95 342.00
IUUC-Bci-013964 Botrytis cinerea 45.29 2.00e-77 281.00
IUUC-Bdi-015050 Brachypodium distachyon 79.18 8.00e-162 562.00
IUUC-Bol-015367 Brassica oleracea 93.98 0.00e+00 686.00
IUUC-Bra-016903 Brassica rapa 93.98 0.00e+00 686.00
IUUC-Cel-018563 Caenorhabditis elegans 38.04 1.00e-62 232.00
IUUC-Cja-019700 Callithrix jacchus 51.00 5.00e-96 343.00
IUUC-Cfa-020337 Canis familiaris 51.00 8.00e-96 343.00
IUUC-Cpo-021858 Cavia porcellus 50.72 1.00e-95 342.00
IUUC-Cre-022748 Chlamydomonas reinhardtii 53.09 8.00e-105 372.00
IUUC-Csa-023322 Chlorocebus sabaeus 50.72 2.00e-95 341.00
IUUC-Cin-025393 Ciona intestinalis 45.32 2.00e-82 298.00
IUUC-Csv-026093 Ciona savignyi 45.16 9.00e-83 299.00
IUUC-Cgl-026503 Colletotrichum gloeosporioides 37.39 1.00e-54 205.00
IUUC-Cne-026774 Cryptococcus neoformans 41.95 4.00e-68 251.00
IUUC-Cme-027243 Cyanidioschyzon merolae 40.21 3.00e-72 264.00
IUUC-Dre-028159 Danio rerio 50.72 2.00e-95 342.00
IUUC-Dno-028852 Dasypus novemcinctus 51.00 8.00e-96 343.00
IUUC-Dse-031161 Dothistroma septosporum 44.81 2.00e-73 268.00
IUUC-Dme-032009 Drosophila melanogaster 47.71 2.00e-88 318.00
IUUC-Eca-033306 Equus caballus 50.72 4.00e-95 340.00
IUUC-Fca-035579 Felis catus 51.00 8.00e-96 343.00
IUUC-Fal-037582 Ficedula albicollis 50.14 2.00e-94 338.00
IUUC-Fox-037772 Fusarium oxysporum 45.76 3.00e-80 291.00
IUUC-Fso-038368 Fusarium solani 44.82 2.00e-78 285.00
IUUC-Gmo-038500 Gadus morhua 48.99 2.00e-91 328.00
IUUC-Ggr-040019 Gaeumannomyces graminis 42.82 5.00e-79 287.00
IUUC-Gga-040684 Gallus gallus 50.14 4.00e-94 337.00
IUUC-Gac-042592 Gasterosteus aculeatus 50.14 2.00e-93 334.00
IUUC-Gma-043683 Glycine max 83.67 0.00e+00 631.00
IUUC-Ggo-044965 Gorilla gorilla 51.00 1.00e-95 342.00
IUUC-Hsa-046779 Homo sapiens 51.88 3.00e-92 331.00
IUUC-Hvu-047380 Hordeum vulgare 79.66 4.00e-165 573.00
IUUC-Itr-048819 Ictidomys tridecemlineatus 50.72 4.00e-95 340.00
IUUC-Kpa-049284 Komagataella pastoris 42.86 7.00e-79 286.00
IUUC-Lch-050559 Latimeria chalumnae 44.15 2.00e-83 301.00
IUUC-Lpe-051050 Leersia perrieri 80.52 1.00e-173 601.00
IUUC-Loc-052874 Lepisosteus oculatus 50.14 2.00e-93 334.00
IUUC-Lma-053085 Leptosphaeria maculans 41.57 5.00e-69 254.00
IUUC-Laf-053980 Loxodonta africana 51.00 1.00e-95 342.00
IUUC-Mcc-055408 Macaca mulatta 51.00 4.00e-96 343.00
IUUC-Meu-056551 Macropus eugenii 46.04 1.00e-79 288.00
IUUC-Mor-057248 Magnaporthe oryzae 46.22 2.00e-85 308.00
IUUC-Mpo-057390 Magnaporthe poae 42.61 5.00e-79 286.00
IUUC-Mtr-057675 Medicago truncatula 83.67 0.00e+00 632.00
IUUC-Mla-059155 Melampsora laricipopulina 43.50 3.00e-90 324.00
IUUC-Mga-060140 Meleagris gallopavo 50.32 6.00e-85 306.00
IUUC-Mvi-060311 Microbotryum violaceum 47.19 7.00e-87 313.00
IUUC-Mmr-061533 Microcebus murinus 50.72 2.00e-95 341.00
IUUC-Mdo-062593 Monodelphis domestica 50.43 2.00e-94 338.00
IUUC-Mmu-063362 Mus musculus 51.00 7.00e-96 343.00
IUUC-Mac-064968 Musa acuminata 73.80 8.00e-156 542.00
IUUC-Mpu-065722 Mustela putorius furo 51.00 7.00e-96 343.00
IUUC-Mlu-068124 Myotis lucifugus 50.72 2.00e-95 342.00
IUUC-Nfi-068595 Neosartorya fischeri 47.20 2.00e-85 308.00
IUUC-Ncr-068790 Neurospora crassa 45.54 1.00e-80 292.00
IUUC-Nle-069395 Nomascus leucogenys 41.85 4.00e-67 247.00
IUUC-Opr-070320 Ochotona princeps 46.42 2.00e-82 298.00
IUUC-Ont-071303 Oreochromis niloticus 50.43 2.00e-94 338.00
IUUC-Oan-073724 Ornithorhynchus anatinus 50.14 2.00e-93 335.00
IUUC-Ocu-074961 Oryctolagus cuniculus 51.70 3.00e-93 334.00
IUUC-Oba-075879 Oryza barthii 81.08 8.00e-166 575.00
IUUC-Obr-076326 Oryza brachyantha 79.37 2.00e-172 597.00
IUUC-Ogl-077767 Oryza glaberrima 80.57 1.00e-172 598.00
IUUC-Ogu-078760 Oryza glumaepatula 77.13 1.00e-157 548.00
IUUC-Oin-080219 Oryza indica 80.57 1.00e-172 598.00
IUUC-Olo-081007 Oryza longistaminata 80.57 1.00e-172 598.00
IUUC-Ome-081848 Oryza meridionalis 72.65 3.00e-155 540.00
IUUC-Oni-082844 Oryza nivara 80.57 1.00e-172 598.00
IUUC-Opu-083511 Oryza punctata 75.87 4.00e-168 583.00
IUUC-Oru-085012 Oryza rufipogon 80.57 1.00e-172 598.00
IUUC-Osa-085287 Oryza sativa 80.57 1.00e-172 598.00
IUUC-Ola-087292 Oryzias latipes 50.43 3.00e-94 337.00
IUUC-Olu-087689 Ostreococcus lucimarinus 57.59 1.00e-118 418.00
IUUC-Oga-088821 Otolemur garnettii 51.00 8.00e-96 343.00
IUUC-Oar-090253 Ovis aries 51.00 8.00e-96 343.00
IUUC-Ptr-091097 Pan troglodytes 50.43 7.00e-95 340.00
IUUC-Pan-091835 Papio anubis 51.00 5.00e-96 343.00
IUUC-Psi-093000 Pelodiscus sinensis 50.28 6.00e-95 340.00
IUUC-Pma-094273 Petromyzon marinus 50.70 3.00e-95 341.00
IUUC-Pno-094920 Phaeosphaeria nodorum 39.44 2.00e-64 238.00
IUUC-Ppa-095202 Physcomitrella patens 72.48 3.00e-116 410.00
IUUC-Pfo-096388 Poecilia formosa 50.72 3.00e-95 341.00
IUUC-Pab-097533 Pongo abelii 51.00 5.00e-96 343.00
IUUC-Pop-099348 Populus trichocarpa 80.52 3.00e-170 590.00
IUUC-Ppe-101817 Prunus persica 82.34 4.00e-172 596.00
IUUC-Pva-102233 Pteropus vampyrus 50.72 5.00e-96 343.00
IUUC-Pgr-103342 Puccinia graminis 46.74 3.00e-90 324.00
IUUC-Ptt-103836 Puccinia triticina 45.75 1.00e-90 325.00
IUUC-Pte-104387 Pyrenophora teres 41.87 6.00e-70 256.00
IUUC-Pyt-104737 Pyrenophora triticirepentis 40.33 2.00e-70 258.00
IUUC-Rno-105548 Rattus norvegicus 50.72 9.00e-96 342.00
IUUC-Sce-106379 Saccharomyces cerevisiae 42.25 6.00e-79 286.00
IUUC-Sha-107617 Sarcophilus harrisii 50.82 4.00e-68 249.00
IUUC-Sja-107668 Schizosaccharomyces japonicus 47.13 3.00e-83 301.00
IUUC-Spo-108293 Schizosaccharomyces pombe 46.07 8.00e-88 316.00
IUUC-Smo-109568 Selaginella moellendorffii 69.43 1.00e-151 528.00
IUUC-Sit-110521 Setaria italica 81.29 8.00e-166 575.00
IUUC-Sly-111037 Solanum lycopersicum 78.35 7.00e-174 602.00
IUUC-Sbi-113852 Sorghum bicolor 80.18 4.00e-165 573.00
IUUC-Sre-114922 Sporisorium reilianum 37.10 1.00e-62 233.00
IUUC-Ssc-116305 Sus scrofa 51.00 1.00e-95 342.00
IUUC-Tgu-116751 Taeniopygia guttata 50.14 3.00e-94 338.00
IUUC-Tru-117798 Takifugu rubripes 51.30 9.00e-97 346.00
IUUC-Tsy-119523 Tarsius syrichta 51.43 2.00e-82 297.00
IUUC-Tni-120477 Tetraodon nigroviridis 50.72 5.00e-95 340.00
IUUC-Tca-121802 Theobroma cacao 81.69 5.00e-178 615.00
IUUC-Tre-121994 Trichoderma reesei 44.82 3.00e-77 281.00
IUUC-Tvi-122631 Trichoderma virens 44.82 3.00e-77 281.00
IUUC-Tae-124794 Triticum aestivum 79.66 3.00e-164 570.00
IUUC-Tur-126720 Triticum urartu 71.89 6.00e-153 533.00
IUUC-Tme-127152 Tuber melanosporum 50.45 3.00e-87 314.00
IUUC-Tbe-127319 Tupaia belangeri 42.74 6.00e-47 180.00
IUUC-Ttr-129207 Tursiops truncatus 50.43 5.00e-95 340.00
IUUC-Uma-129342 Ustilago maydis 36.56 2.00e-57 215.00
IUUC-Vda-129865 Verticillium dahliae 45.59 9.00e-82 296.00
IUUC-Vpa-130076 Vicugna pacos 45.13 1.00e-70 259.00
IUUC-Vvi-131104 Vitis vinifera 83.09 1.00e-179 621.00
IUUC-Xtr-132917 Xenopus tropicalis 43.22 2.00e-68 251.00
IUUC-Xma-133615 Xiphophorus maculatus 50.43 6.00e-95 340.00
IUUC-Yli-134431 Yarrowia lipolytica 44.11 7.00e-78 283.00
IUUC-Zma-135142 Zea mays 75.14 4.00e-162 563.00
Created Date 25-Jun-2017

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