iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099271

Ensembl Protein ID

POPTR_0010s13610.1

UniProt Accession

B9HWI6; B9HWI6_POPTR

Genbank Protein ID

EEF02116.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTR_0010s13610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s13610	POPTR_0010s13610.1	POPTR_0010s13610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.30e-12	47.2	167	207
ULD/UDP/UBQ/UBQ_PIM	4.50e-26	91.7	1	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           e +++q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 167  EGAVQQILDMGggsWDRDTVVRALRAAYNNPERAVEYLYTG 207
           789************************************87 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksks 76
           mk++vktlkg++f +ev++ dtv+++K++i++ +g   +p+eqq LIy+Gk+LkDdttL e+++ ++s+v+++++k+ks
   Q: 1    MKIFVKTLKGSTFDIEVKPGDTVADVKKNIETAQGasvYPAEQQMLIYQGKVLKDDTTLGENKVAENSFVVIMLSKAKS 79
           99**************************************************************************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKIFVKTLKG STFDIEVKPG DTVADVKKNI ETAQGASVYP AEQQMLIYQG KVLKDDTTLG 60
ENKVAENSFV VIMLSKAKSS SGEGSTTSAA PTPKAPTTSA PMSTAPPAST VTSALPTSVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGAGCCCT TGCGGATCGG GGGAGTGAAT TACAATCCGG TCGAGAGTGG AGATCGTGAA 60
GAAGAAGAAG AAGGATGAAG ATTTTTGTTA AGACTTTGAA AGGCAGCACT TTTGACATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s13610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Sre-114894	Sporisorium reilianum	54.69	4.00e-13	68.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence