iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016274

Ensembl Protein ID

Bo4g053890.1

UniProt Accession

A0A0D3BTC9; A0A0D3BTC9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g053890	Bo4g053890.1	Bo4g053890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-16	61.6	143	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtl.lvsGsdDgtikvWD 29
           H++svt++a+ ++++ l++ s Dg+++v++
   Q: 143  HESSVTSVAWhPNNIlLATTSTDGKCRVFS 172
           9**********77663699*********97 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAVVDVHRFA ESITCHAWSP DLSMVALCPN NNEVHIYKSS QDQWERLHVL EKHDQIVSGI 60
DWSSKSNKIV TVSHDRNSYV WSLEGGEWVP TLVILRLNRA ALCVQWSPKE NKFAVGSGAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGTGG TGGATGTTCA CCGATTCGCA GAGTCAATCA CTTGCCATGC TTGGAGTCCT 60
GATCTCTCCA GTAAGTTTTT CCTACCTCTT GCTCCTTTTT GTGAAGATGA GAAAAAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	60.16	4.00e-133	467.00
IUUC-Aml-001709	Ailuropoda melanoleuca	42.13	4.00e-82	297.00
IUUC-Atr-002844	Amborella trichopoda	76.34	1.00e-104	372.00
IUUC-Apl-003325	Anas platyrhynchos	42.67	4.00e-81	294.00
IUUC-Aca-004736	Anolis carolinensis	42.13	7.00e-81	293.00
IUUC-Aly-005532	Arabidopsis lyrata	92.65	0.00e+00	706.00
IUUC-Ath-006683	Arabidopsis thaliana	93.44	0.00e+00	713.00
IUUC-Acl-008334	Aspergillus clavatus	38.32	6.00e-68	250.00
IUUC-Afl-008485	Aspergillus flavus	38.07	9.00e-64	238.00
IUUC-Afu-008780	Aspergillus fumigatus	37.73	5.00e-67	247.00
IUUC-Ani-009417	Aspergillus nidulans	39.41	6.00e-67	247.00
IUUC-Ang-009543	Aspergillus niger	37.97	6.00e-68	250.00
IUUC-Aor-010234	Aspergillus oryzae	38.06	7.00e-67	247.00
IUUC-Ate-010386	Aspergillus terreus	36.90	4.00e-65	241.00
IUUC-Ame-011512	Astyanax mexicanus	42.43	2.00e-83	301.00
IUUC-Bgr-012192	Blumeria graminis	35.28	1.00e-58	220.00
IUUC-Bta-012530	Bos taurus	42.40	5.00e-78	284.00
IUUC-Bci-013616	Botrytis cinerea	37.40	2.00e-60	226.00
IUUC-Bdi-014632	Brachypodium distachyon	73.78	1.00e-167	582.00
IUUC-Cel-018122	Caenorhabditis elegans	39.94	5.00e-67	247.00
IUUC-Cja-019362	Callithrix jacchus	42.06	2.00e-78	286.00
IUUC-Cfa-020067	Canis familiaris	41.19	9.00e-81	293.00
IUUC-Cpo-022461	Cavia porcellus	41.67	2.00e-81	295.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	40.84	1.00e-40	159.00
IUUC-Csa-023277	Chlorocebus sabaeus	41.33	1.00e-79	289.00
IUUC-Cin-025186	Ciona intestinalis	37.53	7.00e-66	243.00
IUUC-Csv-026275	Ciona savignyi	37.63	8.00e-68	250.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	34.32	1.00e-55	210.00
IUUC-Cne-026926	Cryptococcus neoformans	36.82	7.00e-71	260.00
IUUC-Dre-028141	Danio rerio	42.16	1.00e-83	302.00
IUUC-Dno-029092	Dasypus novemcinctus	42.90	5.00e-77	282.00
IUUC-Dor-030559	Dipodomys ordii	40.43	1.00e-80	293.00
IUUC-Dme-031907	Drosophila melanogaster	38.42	2.00e-67	249.00
IUUC-Eca-034074	Equus caballus	42.06	1.00e-78	286.00
IUUC-Eeu-035041	Erinaceus europaeus	31.30	1.00e-16	80.50
IUUC-Fca-036254	Felis catus	41.67	7.00e-82	296.00
IUUC-Fal-037453	Ficedula albicollis	41.94	8.00e-83	300.00
IUUC-Gmo-039673	Gadus morhua	40.10	4.00e-75	274.00
IUUC-Ggr-039762	Gaeumannomyces graminis	37.40	1.00e-60	226.00
IUUC-Gga-040898	Gallus gallus	42.86	3.00e-83	301.00
IUUC-Gac-042236	Gasterosteus aculeatus	40.85	7.00e-81	293.00
IUUC-Gma-042803	Glycine max	77.33	1.00e-175	608.00
IUUC-Ggo-045355	Gorilla gorilla	29.73	1.00e-44	173.00
IUUC-Hsa-046623	Homo sapiens	41.40	2.00e-81	295.00
IUUC-Hvu-047456	Hordeum vulgare	64.80	1.00e-67	248.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	41.94	1.00e-82	299.00
IUUC-Kpa-049288	Komagataella pastoris	36.22	6.00e-52	197.00
IUUC-Lch-049679	Latimeria chalumnae	41.78	3.00e-81	295.00
IUUC-Lpe-050869	Leersia perrieri	72.60	1.00e-163	568.00
IUUC-Loc-052140	Lepisosteus oculatus	41.35	1.00e-78	286.00
IUUC-Lma-053109	Leptosphaeria maculans	38.79	4.00e-64	238.00
IUUC-Laf-054271	Loxodonta africana	42.40	5.00e-78	284.00
IUUC-Mcc-054857	Macaca mulatta	43.67	9.00e-77	280.00
IUUC-Meu-056302	Macropus eugenii	42.59	5.00e-85	307.00
IUUC-Mor-057167	Magnaporthe oryzae	36.68	2.00e-60	226.00
IUUC-Mtr-057659	Medicago truncatula	77.60	2.00e-180	624.00
IUUC-Mla-058886	Melampsora laricipopulina	37.41	1.00e-71	263.00
IUUC-Mga-059279	Meleagris gallopavo	42.86	2.00e-83	302.00
IUUC-Mvi-060302	Microbotryum violaceum	37.22	2.00e-71	262.00
IUUC-Mmr-060752	Microcebus murinus	41.80	4.00e-81	295.00
IUUC-Mdo-062326	Monodelphis domestica	42.33	4.00e-79	288.00
IUUC-Mmu-064099	Mus musculus	41.71	8.00e-83	300.00
IUUC-Mac-064632	Musa acuminata	74.05	8.00e-171	592.00
IUUC-Mpu-066247	Mustela putorius furo	41.51	7.00e-81	293.00
IUUC-Mlu-067571	Myotis lucifugus	41.67	1.00e-81	296.00
IUUC-Nfi-068383	Neosartorya fischeri	37.99	7.00e-68	250.00
IUUC-Nle-069900	Nomascus leucogenys	42.06	2.00e-78	286.00
IUUC-Opr-070386	Ochotona princeps	37.87	3.00e-62	231.00
IUUC-Ont-071316	Oreochromis niloticus	41.69	1.00e-77	283.00
IUUC-Oan-072692	Ornithorhynchus anatinus	42.23	8.00e-83	300.00
IUUC-Ocu-074187	Oryctolagus cuniculus	41.40	4.00e-82	298.00
IUUC-Oba-075379	Oryza barthii	72.88	9.00e-165	572.00
IUUC-Obr-076404	Oryza brachyantha	72.43	1.00e-165	575.00
IUUC-Ogu-078759	Oryza glumaepatula	72.88	1.00e-164	572.00
IUUC-Oin-079118	Oryza indica	72.16	6.00e-166	576.00
IUUC-Olo-081055	Oryza longistaminata	73.42	7.00e-144	503.00
IUUC-Ome-081281	Oryza meridionalis	72.60	4.00e-164	570.00
IUUC-Oni-083043	Oryza nivara	72.88	9.00e-165	572.00
IUUC-Opu-083392	Oryza punctata	61.64	1.00e-132	465.00
IUUC-Oru-084839	Oryza rufipogon	72.88	9.00e-165	572.00
IUUC-Osa-085377	Oryza sativa	72.43	3.00e-166	577.00
IUUC-Ola-087274	Oryzias latipes	42.28	9.00e-76	276.00
IUUC-Oga-088610	Otolemur garnettii	41.62	7.00e-82	296.00
IUUC-Oar-089613	Ovis aries	42.33	6.00e-79	287.00
IUUC-Ptr-091023	Pan troglodytes	41.40	2.00e-81	295.00
IUUC-Pan-091727	Papio anubis	41.67	4.00e-82	298.00
IUUC-Psi-093767	Pelodiscus sinensis	42.13	2.00e-80	292.00
IUUC-Pma-094124	Petromyzon marinus	42.03	3.00e-84	305.00
IUUC-Pno-095031	Phaeosphaeria nodorum	37.63	6.00e-64	237.00
IUUC-Ppa-095738	Physcomitrella patens	58.85	1.00e-134	472.00
IUUC-Pfo-097107	Poecilia formosa	42.55	9.00e-77	280.00
IUUC-Pab-098238	Pongo abelii	40.85	1.00e-81	296.00
IUUC-Pop-098954	Populus trichocarpa	79.03	1.00e-129	454.00
IUUC-Pca-100580	Procavia capensis	41.78	1.00e-81	296.00
IUUC-Ppe-101681	Prunus persica	77.75	0.00e+00	626.00
IUUC-Pva-102928	Pteropus vampyrus	40.11	1.00e-76	279.00
IUUC-Pgr-103309	Puccinia graminis	40.05	1.00e-72	266.00
IUUC-Ptt-103959	Puccinia triticina	38.52	1.00e-69	256.00
IUUC-Pte-104384	Pyrenophora teres	38.44	2.00e-61	228.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	38.44	2.00e-61	229.00
IUUC-Rno-104846	Rattus norvegicus	41.03	2.00e-82	298.00
IUUC-Sce-106411	Saccharomyces cerevisiae	35.26	1.00e-52	200.00
IUUC-Sha-106691	Sarcophilus harrisii	42.33	3.00e-79	288.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	37.40	1.00e-60	226.00
IUUC-Smo-108836	Selaginella moellendorffii	59.74	1.00e-141	495.00
IUUC-Sit-110150	Setaria italica	73.44	3.00e-169	587.00
IUUC-Sly-111048	Solanum lycopersicum	73.28	2.00e-169	587.00
IUUC-Sar-113599	Sorex araneus	51.72	2.00e-63	235.00
IUUC-Sre-115090	Sporisorium reilianum	43.51	7.00e-66	244.00
IUUC-Ssc-115851	Sus scrofa	42.40	4.00e-78	284.00
IUUC-Tgu-116701	Taeniopygia guttata	42.67	8.00e-82	296.00
IUUC-Tru-118106	Takifugu rubripes	41.51	3.00e-82	298.00
IUUC-Tsy-119515	Tarsius syrichta	56.94	9.00e-45	173.00
IUUC-Tni-119844	Tetraodon nigroviridis	42.13	7.00e-76	277.00
IUUC-Tae-125810	Triticum aestivum	65.38	2.00e-158	551.00
IUUC-Tur-126640	Triticum urartu	69.15	8.00e-151	526.00
IUUC-Tbe-127321	Tupaia belangeri	48.59	9.00e-72	263.00
IUUC-Ttr-128698	Tursiops truncatus	41.67	1.00e-81	296.00
IUUC-Uma-129423	Ustilago maydis	44.56	1.00e-65	243.00
IUUC-Vvi-131647	Vitis vinifera	79.36	0.00e+00	626.00
IUUC-Xtr-131893	Xenopus tropicalis	41.94	2.00e-79	289.00
IUUC-Xma-133435	Xiphophorus maculatus	42.55	9.00e-77	280.00
IUUC-Yli-134471	Yarrowia lipolytica	36.70	5.00e-61	228.00
IUUC-Zma-135615	Zea mays	69.61	1.00e-164	572.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence