iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007498

UUCD1 version

UUC-ArT-00544

Ensembl Protein ID

AT1G72200.1

UniProt Accession

Q84W40; Q9C7T5; ATL11_ARATH

Genbank Protein ID

AAG51795.1; AEE35288.1; AAO42269.1; AAW38988.1

Protein Name

RING-H2 finger protein ATL11; RING-type E3 ubiquitin transferase ATL11

Genbank Nucleotide ID

AC067754; CP002684; BT004268; BT020487

Gene Name

ATL11; At1g72200; T9N14.11

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G72200	AT1G72200.1	AT1G72200.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-06	28.9	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++ p C Hvfh  C+ +w       + + +CPlCr
   Q: 144  CSVCLNEFedDETLRLIPkCCHVFHPGCIDAW------LRSHTTCPLCR 186
           ********65333888889*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MNPKGRTNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFKF VAGQATHGGS DVSGDSSRFD 60
PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN DAGNWLATNR QQARGLDASI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGTCAA CCAAATAAAC AAAAACATAT TCATTAATTA TGATGCAACA TCTTTAAATA 60
GTGCTATTGT TCAAACTTCA AAGTCAACCT ACCAACCACA AACTCTTTGT AACCATTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT1G72200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006388	Arabidopsis lyrata	90.59	0.00e+00	679.00
IUUC-Afu-009087	Aspergillus fumigatus	42.35	3.00e-14	70.90
IUUC-Bol-015643	Brassica oleracea	76.34	2.00e-168	584.00
IUUC-Bra-017965	Brassica rapa	75.49	4.00e-172	596.00
IUUC-Fal-036671	Ficedula albicollis	28.57	2.00e-13	70.10
IUUC-Gma-043872	Glycine max	44.48	1.00e-53	202.00
IUUC-Mtr-057905	Medicago truncatula	44.03	2.00e-57	215.00
IUUC-Ppa-095506	Physcomitrella patens	45.21	4.00e-30	125.00
IUUC-Stu-112280	Solanum tuberosum	40.78	8.00e-67	246.00
IUUC-Tca-121082	Theobroma cacao	47.35	1.00e-81	295.00
IUUC-Uma-129481	Ustilago maydis	42.59	7.00e-12	67.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence