iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s11110	POPTR_0001s11110.2	POPTR_0001s11110.2
POPTR_0001s11110	POPTR_0001s11110.1	POPTR_0001s11110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-26	89.8	421	452

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H++ vt+++f   +d++++sGs Dg++++W++
   Q: 421  HNNYVTSVDFnpvDDNYFISGSIDGKVRIWEV 452
           999*********766***************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MIKMGNFSEE EEQEPSFFDT REEISSVSDW SSDCGDCSPS VFNSFSYDDW TRNPESVQDR 60
RRRFLKWMGL SLDRNDGFEE KFGDDFKNEI QWVGVDRTED NSGAVLRTSS IEDDFLSTQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGAGAGA GAGACAGAAA ATTCAGATTT CAGACAAAAT CAAAAGCAAC GTTTTACGTT 60
ACCCTTTGGA TCTTCTCTCT TCCTTTCCTT TTTCCTTTTT CCTTCTTCGT ATCGACACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s11110g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042979	Glycine max	54.73	0.00e+00	719.00
IUUC-Mtr-058554	Medicago truncatula	52.72	0.00e+00	706.00
IUUC-Ppe-101343	Prunus persica	59.15	0.00e+00	840.00
IUUC-Sly-111162	Solanum lycopersicum	53.06	0.00e+00	727.00
IUUC-Stu-112019	Solanum tuberosum	52.74	0.00e+00	723.00
IUUC-Tca-121771	Theobroma cacao	61.87	0.00e+00	820.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence