iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005646

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_895934

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_203008.1	scaffold_203008.1	scaffold_203008.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-06	27.4	185	225
UBD/ZnF/ZnF_UBP	1.70e-26	92.9	236	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle++++     l++ C+H fh +C+ +w        +  +CP+Cr
   Q: 185  CPVCLERLDQDtggILTTMCNHSFHCSCISNW--------PDSSCPVCR 225
           ********44334488899*************........7888****8 PP

UBD/ZnF/ZnF_UBP

   S: 3    csvcdktenlWlcLtcgsvgCGRyvegHalkHyeetqhplvlslstlsvycYacddyvhr 62
           c++c++tenlW+c++cg vgCGRy+egHa++H+eet+h+++l+l+t++v++Ya+d+yvhr
   Q: 236  CCICQTTENLWMCVICGVVGCGRYKEGHARRHWEETDHCYSLELETQRVWDYAGDNYVHR 295
           9*********************************************************96 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MMMPSTSTII AGEESVVLPP VASVSGESSM SDMTQTVHFS SGNPRIGETR GVMHLFSDDA 60
VSSSSSSSSL NLPIGRNPLV CVLGVPNHMT YADFCQFCGS FIQHILEMRT VRNDGIENRY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTTCTTTG GCGGCAAGAG ATGATGATGC CTTCCACTTC AACCATAATC GCCGGTGAAG 60
AATCGGTAGT ACTACCACCG GTGGCAAGCG TTTCCGGTGA ATCGTCTATG TCCGATATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011422--BRAP2
IPR033273--BRIZ1
IPR013829--Hemagglutn_stalk
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50089--ZF_RING_2
PS50271--ZF_UBP

Pfam

PF07576--BRAP2
PF13639--zf-RING_2
PF02148--zf-UBP

SMART

SM00184--RING
SM00290--ZnF_UBP

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0010029--P:regulation of seed germination

KEGG

aly:ARALYDRAFT_895934

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015518	Brassica oleracea	84.18	0.00e+00	835.00
IUUC-Bra-017435	Brassica rapa	85.33	0.00e+00	832.00
IUUC-Cho-025045	Choloepus hoffmanni	34.56	1.00e-21	97.10
IUUC-Cne-026980	Cryptococcus neoformans	38.95	7.00e-55	207.00
IUUC-Dme-032095	Drosophila melanogaster	33.05	7.00e-71	260.00
IUUC-Ete-032227	Echinops telfairi	36.26	3.00e-50	192.00
IUUC-Eeu-035030	Erinaceus europaeus	37.50	2.00e-33	136.00
IUUC-Lch-050408	Latimeria chalumnae	33.07	2.00e-77	282.00
IUUC-Rno-106037	Rattus norvegicus	43.39	3.00e-71	261.00
IUUC-Sre-114897	Sporisorium reilianum	39.45	4.00e-61	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence