iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129841

Ensembl Protein ID

EGY17839

UniProt Accession

G2WUP8; G2WUP8_VERDV

Genbank Protein ID

EGY17839.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

DS572696

Gene Name

TIF34; VDAG_01521

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01521	EGY17839	EGY17839

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-22	75.5	50	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH + ++ ++  ++ t+++sGs D+t+++WD+++g++lk+
   Q: 50   GHVGAIWTVDVdPTsTMIASGSADNTMRLWDVKSGKCLKT 89
           89999****99*777**********************986 PP

Organism

Verticillium dahliae

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLAGHE RALTQIKYNL DGDLIFSVAK DQQICAWYAH NGERLGTYHG HVGAIWTVDV 60
DPTSTMIASG SADNTMRLWD VKSGKCLKTW EFPTAVKRVE FNEDGTKLLG VTEKRMGYLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCCA TTCTTCTCGC CGGCCACGAG CGTGCCCTCA CGCAGATCAA GTACGCGACA 60
CCCCAAAGAC ACCATGTCAT ATCACCAATC CGAGCGCGAG CATGGCAGTG GTCATAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0002188--P:translation reinitiation

KEGG

vda:VDAG_01521

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	50.00	6.00e-29	119.00
IUUC-Aml-001321	Ailuropoda melanoleuca	52.76	6.00e-97	345.00
IUUC-Atr-002468	Amborella trichopoda	45.83	1.00e-46	177.00
IUUC-Apl-003841	Anas platyrhynchos	53.07	1.00e-97	347.00
IUUC-Aca-005123	Anolis carolinensis	52.60	1.00e-98	351.00
IUUC-Aly-005473	Arabidopsis lyrata	46.34	2.00e-78	283.00
IUUC-Ath-007094	Arabidopsis thaliana	45.73	8.00e-78	281.00
IUUC-Ago-008000	Ashbya gossypii	51.04	2.00e-98	350.00
IUUC-Acl-008098	Aspergillus clavatus	70.50	4.00e-146	508.00
IUUC-Afl-008494	Aspergillus flavus	72.75	5.00e-151	525.00
IUUC-Afu-009080	Aspergillus fumigatus	71.30	9.00e-148	514.00
IUUC-Ani-009230	Aspergillus nidulans	71.56	1.00e-149	520.00
IUUC-Aor-010114	Aspergillus oryzae	72.75	5.00e-151	525.00
IUUC-Ate-010285	Aspergillus terreus	71.86	6.00e-150	521.00
IUUC-Ame-011534	Astyanax mexicanus	51.83	4.00e-98	349.00
IUUC-Bgr-012121	Blumeria graminis	77.54	1.00e-155	540.00
IUUC-Bta-013143	Bos taurus	52.91	1.00e-97	347.00
IUUC-Bci-013950	Botrytis cinerea	83.08	9.00e-171	590.00
IUUC-Bdi-015019	Brachypodium distachyon	46.15	3.00e-79	286.00
IUUC-Bol-015709	Brassica oleracea	46.36	2.00e-76	278.00
IUUC-Bra-017760	Brassica rapa	46.06	3.00e-76	277.00
IUUC-Cel-018226	Caenorhabditis elegans	42.55	8.00e-77	278.00
IUUC-Cja-019741	Callithrix jacchus	52.60	2.00e-97	347.00
IUUC-Cfa-021204	Canis familiaris	52.45	2.00e-96	343.00
IUUC-Cpo-021661	Cavia porcellus	52.76	2.00e-97	346.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	45.34	6.00e-78	282.00
IUUC-Csa-024038	Chlorocebus sabaeus	52.60	2.00e-97	347.00
IUUC-Cin-025597	Ciona intestinalis	49.40	3.00e-94	336.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	92.17	0.00e+00	644.00
IUUC-Cne-026838	Cryptococcus neoformans	54.27	8.00e-104	368.00
IUUC-Cme-027304	Cyanidioschyzon merolae	41.82	3.00e-66	243.00
IUUC-Dre-028567	Danio rerio	51.99	2.00e-97	346.00
IUUC-Dno-029171	Dasypus novemcinctus	52.45	4.00e-96	343.00
IUUC-Dor-030257	Dipodomys ordii	41.24	1.00e-34	138.00
IUUC-Dse-031191	Dothistroma septosporum	73.65	1.00e-144	503.00
IUUC-Dme-031879	Drosophila melanogaster	45.87	1.00e-85	308.00
IUUC-Ete-032336	Echinops telfairi	48.08	4.00e-51	192.00
IUUC-Eca-033259	Equus caballus	52.45	2.00e-96	343.00
IUUC-Eeu-035153	Erinaceus europaeus	44.67	2.00e-29	121.00
IUUC-Fca-036489	Felis catus	52.45	2.00e-96	343.00
IUUC-Fal-037485	Ficedula albicollis	53.07	5.00e-98	348.00
IUUC-Fox-037860	Fusarium oxysporum	87.09	3.00e-180	622.00
IUUC-Fso-038188	Fusarium solani	89.19	6.00e-175	604.00
IUUC-Gmo-039311	Gadus morhua	52.15	4.00e-97	345.00
IUUC-Ggr-040045	Gaeumannomyces graminis	81.63	4.00e-171	591.00
IUUC-Gga-040645	Gallus gallus	52.24	2.00e-96	343.00
IUUC-Gac-042086	Gasterosteus aculeatus	51.52	2.00e-95	340.00
IUUC-Gma-043246	Glycine max	46.46	2.00e-79	287.00
IUUC-Ggo-045578	Gorilla gorilla	52.60	2.00e-97	347.00
IUUC-Hsa-046734	Homo sapiens	52.60	2.00e-97	347.00
IUUC-Hvu-047553	Hordeum vulgare	45.23	1.00e-78	284.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	52.76	3.00e-97	346.00
IUUC-Kpa-049325	Komagataella pastoris	55.42	1.00e-107	380.00
IUUC-Lch-049620	Latimeria chalumnae	52.16	2.00e-87	313.00
IUUC-Lpe-051338	Leersia perrieri	46.01	8.00e-76	275.00
IUUC-Loc-052094	Lepisosteus oculatus	46.93	3.00e-82	296.00
IUUC-Lma-053047	Leptosphaeria maculans	75.68	8.00e-155	537.00
IUUC-Laf-053801	Loxodonta africana	52.48	6.00e-95	338.00
IUUC-Mcc-055498	Macaca mulatta	47.09	4.00e-79	285.00
IUUC-Meu-056729	Macropus eugenii	49.09	9.00e-87	311.00
IUUC-Mor-057025	Magnaporthe oryzae	80.72	3.00e-169	585.00
IUUC-Mpo-057511	Magnaporthe poae	83.73	1.00e-173	600.00
IUUC-Mtr-058051	Medicago truncatula	45.40	1.00e-77	281.00
IUUC-Mla-059061	Melampsora laricipopulina	57.28	1.00e-107	380.00
IUUC-Mga-059229	Meleagris gallopavo	52.44	2.00e-95	340.00
IUUC-Mvi-060399	Microbotryum violaceum	55.12	3.00e-105	372.00
IUUC-Mmr-060764	Microcebus murinus	52.91	5.00e-98	348.00
IUUC-Mdo-062088	Monodelphis domestica	51.99	6.00e-95	338.00
IUUC-Mmu-064304	Mus musculus	52.60	1.00e-97	347.00
IUUC-Mac-065520	Musa acuminata	46.23	1.00e-77	281.00
IUUC-Mpu-066340	Mustela putorius furo	52.45	2.00e-96	343.00
IUUC-Mlu-067111	Myotis lucifugus	52.76	3.00e-97	346.00
IUUC-Nfi-068478	Neosartorya fischeri	71.30	6.00e-148	514.00
IUUC-Ncr-068820	Neurospora crassa	84.94	5.00e-177	611.00
IUUC-Nle-069903	Nomascus leucogenys	52.45	1.00e-96	344.00
IUUC-Opr-070221	Ochotona princeps	51.99	7.00e-96	341.00
IUUC-Ont-071765	Oreochromis niloticus	51.68	4.00e-97	345.00
IUUC-Oan-073660	Ornithorhynchus anatinus	50.68	9.00e-83	298.00
IUUC-Ocu-074039	Oryctolagus cuniculus	52.45	9.00e-97	344.00
IUUC-Oba-075395	Oryza barthii	39.57	4.00e-62	229.00
IUUC-Obr-076334	Oryza brachyantha	43.25	1.00e-72	264.00
IUUC-Ogl-077060	Oryza glaberrima	44.65	2.00e-76	277.00
IUUC-Ogu-078207	Oryza glumaepatula	45.71	2.00e-79	287.00
IUUC-Oin-079878	Oryza indica	45.71	2.00e-79	286.00
IUUC-Olo-080677	Oryza longistaminata	39.47	7.00e-71	259.00
IUUC-Ome-081228	Oryza meridionalis	35.39	2.00e-32	130.00
IUUC-Oni-082411	Oryza nivara	39.33	3.00e-61	226.00
IUUC-Opu-083136	Oryza punctata	45.09	7.00e-79	285.00
IUUC-Oru-084916	Oryza rufipogon	45.37	7.00e-78	281.00
IUUC-Osa-085454	Oryza sativa	45.71	2.00e-79	286.00
IUUC-Ola-087053	Oryzias latipes	53.21	5.00e-99	352.00
IUUC-Olu-087602	Ostreococcus lucimarinus	48.77	2.00e-89	320.00
IUUC-Oga-088154	Otolemur garnettii	52.45	6.00e-97	345.00
IUUC-Oar-089915	Ovis aries	52.76	6.00e-97	345.00
IUUC-Ptr-091124	Pan troglodytes	43.96	1.00e-72	264.00
IUUC-Pan-092035	Papio anubis	52.60	2.00e-97	347.00
IUUC-Psi-094096	Pelodiscus sinensis	53.00	3.00e-62	229.00
IUUC-Pno-094988	Phaeosphaeria nodorum	68.55	1.00e-132	463.00
IUUC-Ppa-095536	Physcomitrella patens	49.54	6.00e-85	305.00
IUUC-Pfo-096101	Poecilia formosa	51.99	2.00e-97	346.00
IUUC-Pab-097726	Pongo abelii	52.60	2.00e-97	347.00
IUUC-Pop-099617	Populus trichocarpa	45.85	7.00e-80	288.00
IUUC-Pca-101014	Procavia capensis	52.91	7.00e-98	348.00
IUUC-Ppe-101320	Prunus persica	44.92	4.00e-77	279.00
IUUC-Pva-102789	Pteropus vampyrus	46.79	1.00e-81	294.00
IUUC-Pgr-103479	Puccinia graminis	54.60	1.00e-105	374.00
IUUC-Ptt-103981	Puccinia triticina	54.01	2.00e-104	370.00
IUUC-Pte-104278	Pyrenophora teres	74.40	5.00e-150	521.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	74.40	5.00e-150	521.00
IUUC-Rno-105867	Rattus norvegicus	46.75	3.00e-79	286.00
IUUC-Sce-106251	Saccharomyces cerevisiae	52.52	6.00e-103	365.00
IUUC-Sha-107039	Sarcophilus harrisii	51.67	4.00e-95	339.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	64.02	4.00e-130	455.00
IUUC-Spo-108314	Schizosaccharomyces pombe	65.14	7.00e-129	451.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	82.78	2.00e-170	589.00
IUUC-Smo-108728	Selaginella moellendorffii	44.58	8.00e-79	285.00
IUUC-Sit-110801	Setaria italica	45.23	5.00e-81	292.00
IUUC-Sly-111326	Solanum lycopersicum	46.63	4.00e-80	289.00
IUUC-Stu-112458	Solanum tuberosum	46.63	2.00e-79	286.00
IUUC-Sbi-114063	Sorghum bicolor	45.51	8.00e-81	291.00
IUUC-Sre-115096	Sporisorium reilianum	58.43	1.00e-104	370.00
IUUC-Ssc-116080	Sus scrofa	52.91	1.00e-97	347.00
IUUC-Tgu-116988	Taeniopygia guttata	52.76	2.00e-97	347.00
IUUC-Tru-118766	Takifugu rubripes	51.68	1.00e-96	344.00
IUUC-Tni-120197	Tetraodon nigroviridis	52.29	5.00e-98	348.00
IUUC-Tca-121316	Theobroma cacao	47.08	2.00e-80	290.00
IUUC-Tre-122097	Trichoderma reesei	85.59	6.00e-178	614.00
IUUC-Tvi-122442	Trichoderma virens	86.49	3.00e-180	622.00
IUUC-Tae-125800	Triticum aestivum	44.95	4.00e-78	283.00
IUUC-Tur-126334	Triticum urartu	38.58	5.00e-59	219.00
IUUC-Tme-127038	Tuber melanosporum	71.08	3.00e-146	509.00
IUUC-Ttr-128659	Tursiops truncatus	48.32	3.00e-77	280.00
IUUC-Uma-129464	Ustilago maydis	58.43	5.00e-104	369.00
IUUC-Vvi-131076	Vitis vinifera	45.68	5.00e-78	282.00
IUUC-Xtr-132395	Xenopus tropicalis	53.52	2.00e-99	353.00
IUUC-Xma-133383	Xiphophorus maculatus	51.99	3.00e-97	346.00
IUUC-Yli-134586	Yarrowia lipolytica	60.84	2.00e-114	403.00
IUUC-Zma-135904	Zea mays	46.44	1.00e-81	294.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence