• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Pop-099523
UUCD1 version UUC-PoT-00516
Ensembl Protein ID POPTR_0009s10230.1
UniProt Accession B9HS29; B9HS29_POPTR
Genbank Protein ID EEE87083.2
Protein Name Zinc finger family protein
Genbank Nucleotide ID CM000345
Gene Name POPTRDRAFT_557409; POPTR_0009s10230g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0009s10230 POPTR_0009s10230.1 POPTR_0009s10230.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 79.90 0.00e+00 1608.00 IUUC-Ath-007662
E3 activity/RING/RING 30.67 3.00e-18 89.40 IUUC-Sce-106352
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MEIDSAVEQP PPQQPITSAT ATDGVNQTQS PSGSMGKEES DGVKTVSLLS AARFDDDEEE 60
EDVCRICRNP GDAENPLRYP CACSGSIKFV HQDCLLQWLN HSNARQCEVC KHPFSFSPVY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099523|E3,RING|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACTCTCTCCA ATCGTAACTC GCGCCATCAA CTCACTGAGC CAACTCCGTT CTGTTGCGCC 60
TGTCAGTTCC GTACCTAAAA GCTTTTCCCT TCCCCATGGA GATCGACTCC GCGGTGGAAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099523|E3,RING|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51292--ZF_RING_CH
Pfam

PF12906--RINGv
SMART

SM00744--RINGv
Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0008270--F:zinc ion binding
GO:0030433--P:ubiquitin-dependent ERAD pathway
KEGG pop:POPTR_0009s10230g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000529 Aegilops tauschii 70.43 0.00e+00 661.00
IUUC-Aml-002317 Ailuropoda melanoleuca 30.65 2.00e-54 206.00
IUUC-Atr-002732 Amborella trichopoda 72.33 0.00e+00 1427.00
IUUC-Apl-003346 Anas platyrhynchos 30.00 2.00e-52 200.00
IUUC-Aca-004674 Anolis carolinensis 29.87 2.00e-54 207.00
IUUC-Aly-005919 Arabidopsis lyrata 76.95 0.00e+00 1561.00
IUUC-Ath-007662 Arabidopsis thaliana 79.90 0.00e+00 1608.00
IUUC-Ago-007857 Ashbya gossypii 31.34 5.00e-09 57.00
IUUC-Acl-008114 Aspergillus clavatus 25.44 5.00e-44 173.00
IUUC-Afl-008703 Aspergillus flavus 23.80 2.00e-37 150.00
IUUC-Afu-008872 Aspergillus fumigatus 26.41 5.00e-44 173.00
IUUC-Ani-009237 Aspergillus nidulans 25.23 5.00e-43 170.00
IUUC-Ang-009656 Aspergillus niger 24.76 7.00e-43 169.00
IUUC-Aor-010019 Aspergillus oryzae 23.64 2.00e-36 148.00
IUUC-Ate-010367 Aspergillus terreus 37.50 7.00e-36 146.00
IUUC-Ame-011557 Astyanax mexicanus 29.89 3.00e-45 176.00
IUUC-Bgr-011974 Blumeria graminis 27.50 7.00e-45 176.00
IUUC-Bta-013572 Bos taurus 30.47 9.00e-54 204.00
IUUC-Bci-013727 Botrytis cinerea 26.60 1.00e-49 192.00
IUUC-Bdi-014478 Brachypodium distachyon 71.18 0.00e+00 1451.00
IUUC-Bol-015765 Brassica oleracea 77.79 0.00e+00 1591.00
IUUC-Bra-017013 Brassica rapa 77.08 0.00e+00 1582.00
IUUC-Cel-018256 Caenorhabditis elegans 38.62 4.00e-32 133.00
IUUC-Cja-019361 Callithrix jacchus 30.65 1.00e-54 207.00
IUUC-Cfa-021059 Canis familiaris 30.65 2.00e-54 206.00
IUUC-Cpo-022259 Cavia porcellus 37.04 4.00e-34 139.00
IUUC-Csa-024132 Chlorocebus sabaeus 30.65 3.00e-54 206.00
IUUC-Cho-024752 Choloepus hoffmanni 26.54 4.00e-39 155.00
IUUC-Cin-025673 Ciona intestinalis 31.31 4.00e-32 133.00
IUUC-Cgl-026714 Colletotrichum gloeosporioides 26.79 3.00e-36 147.00
IUUC-Cne-026977 Cryptococcus neoformans 26.65 9.00e-28 119.00
IUUC-Cme-027283 Cyanidioschyzon merolae 22.14 1.00e-37 151.00
IUUC-Dre-027968 Danio rerio 38.22 3.00e-34 140.00
IUUC-Dno-029848 Dasypus novemcinctus 30.05 7.00e-55 208.00
IUUC-Dor-031149 Dipodomys ordii 26.03 4.00e-22 99.80
IUUC-Dse-031295 Dothistroma septosporum 24.84 3.00e-43 170.00
IUUC-Dme-031749 Drosophila melanogaster 38.38 4.00e-37 149.00
IUUC-Ete-032230 Echinops telfairi 31.98 8.00e-39 155.00
IUUC-Eca-034268 Equus caballus 30.65 3.00e-53 203.00
IUUC-Eeu-034731 Erinaceus europaeus 58.93 4.00e-20 93.20
IUUC-Fca-036434 Felis catus 30.29 4.00e-56 212.00
IUUC-Fal-036963 Ficedula albicollis 30.29 8.00e-56 211.00
IUUC-Fox-038040 Fusarium oxysporum 31.56 2.00e-28 121.00
IUUC-Fso-038260 Fusarium solani 35.00 3.00e-28 120.00
IUUC-Gmo-038917 Gadus morhua 34.02 8.00e-38 151.00
IUUC-Ggr-039905 Gaeumannomyces graminis 35.50 4.00e-34 140.00
IUUC-Gga-041150 Gallus gallus 29.57 2.00e-55 210.00
IUUC-Gac-042399 Gasterosteus aculeatus 29.08 1.00e-56 214.00
IUUC-Gma-042674 Glycine max 82.98 0.00e+00 1718.00
IUUC-Ggo-045093 Gorilla gorilla 30.65 1.00e-54 207.00
IUUC-Hsa-046275 Homo sapiens 30.65 1.00e-54 207.00
IUUC-Hvu-047562 Hordeum vulgare 33.38 3.00e-75 276.00
IUUC-Itr-048106 Ictidomys tridecemlineatus 37.04 6.00e-34 137.00
IUUC-Kpa-049197 Komagataella pastoris 47.83 6.00e-18 86.30
IUUC-Lch-050358 Latimeria chalumnae 29.29 8.00e-50 191.00
IUUC-Lpe-051172 Leersia perrieri 66.38 0.00e+00 1302.00
IUUC-Loc-051866 Lepisosteus oculatus 29.53 2.00e-55 210.00
IUUC-Lma-053314 Leptosphaeria maculans 32.89 6.00e-35 143.00
IUUC-Laf-054000 Loxodonta africana 28.90 5.00e-38 152.00
IUUC-Mcc-055595 Macaca mulatta 30.65 4.00e-54 206.00
IUUC-Meu-056541 Macropus eugenii 40.31 4.00e-29 122.00
IUUC-Mor-057197 Magnaporthe oryzae 34.50 7.00e-33 136.00
IUUC-Mpo-057582 Magnaporthe poae 35.00 2.00e-33 137.00
IUUC-Mtr-057848 Medicago truncatula 82.66 0.00e+00 1672.00
IUUC-Mla-058855 Melampsora laricipopulina 25.35 1.00e-11 64.30
IUUC-Mga-059985 Meleagris gallopavo 31.40 3.00e-54 206.00
IUUC-Mvi-060425 Microbotryum violaceum 24.55 1.00e-31 131.00
IUUC-Mmr-061236 Microcebus murinus 29.51 2.00e-49 190.00
IUUC-Mdo-062693 Monodelphis domestica 30.26 9.00e-55 208.00
IUUC-Mmu-064221 Mus musculus 30.47 1.00e-56 214.00
IUUC-Mac-064930 Musa acuminata 97.87 4.00e-28 115.00
IUUC-Mpu-066231 Mustela putorius furo 30.65 2.00e-54 206.00
IUUC-Mlu-067461 Myotis lucifugus 30.65 2.00e-54 207.00
IUUC-Nfi-068608 Neosartorya fischeri 25.65 3.00e-44 174.00
IUUC-Ncr-068743 Neurospora crassa 36.32 2.00e-35 144.00
IUUC-Nle-069646 Nomascus leucogenys 30.65 1.00e-54 207.00
IUUC-Opr-070365 Ochotona princeps 36.65 8.00e-33 135.00
IUUC-Ont-071418 Oreochromis niloticus 30.97 2.00e-55 210.00
IUUC-Oan-073127 Ornithorhynchus anatinus 30.68 1.00e-55 211.00
IUUC-Ocu-074853 Oryctolagus cuniculus 28.06 1.00e-36 148.00
IUUC-Oba-075890 Oryza barthii 71.44 0.00e+00 1441.00
IUUC-Obr-076659 Oryza brachyantha 70.27 0.00e+00 1308.00
IUUC-Ogl-077236 Oryza glaberrima 72.30 0.00e+00 1471.00
IUUC-Ogu-078167 Oryza glumaepatula 71.44 0.00e+00 1441.00
IUUC-Oin-079695 Oryza indica 72.31 0.00e+00 718.00
IUUC-Olo-080267 Oryza longistaminata 61.66 0.00e+00 887.00
IUUC-Oni-083058 Oryza nivara 71.35 0.00e+00 1439.00
IUUC-Opu-083911 Oryza punctata 71.54 0.00e+00 1454.00
IUUC-Oru-084882 Oryza rufipogon 71.44 0.00e+00 1440.00
IUUC-Osa-085984 Oryza sativa 72.39 0.00e+00 1472.00
IUUC-Ola-087523 Oryzias latipes 31.56 3.00e-58 219.00
IUUC-Olu-087805 Ostreococcus lucimarinus 29.58 1.00e-06 47.40
IUUC-Oga-088607 Otolemur garnettii 30.47 1.00e-53 204.00
IUUC-Oar-089601 Ovis aries 30.47 8.00e-54 204.00
IUUC-Ptr-091477 Pan troglodytes 30.65 1.00e-54 207.00
IUUC-Pan-092525 Papio anubis 28.03 7.00e-37 148.00
IUUC-Psi-094098 Pelodiscus sinensis 30.20 4.00e-55 209.00
IUUC-Pma-094706 Petromyzon marinus 47.06 3.00e-33 132.00
IUUC-Pno-094876 Phaeosphaeria nodorum 26.22 6.00e-38 153.00
IUUC-Ppa-095692 Physcomitrella patens 57.05 0.00e+00 1068.00
IUUC-Pfo-096116 Poecilia formosa 37.32 2.00e-38 154.00
IUUC-Pab-098038 Pongo abelii 30.65 1.00e-54 207.00
IUUC-Pca-101000 Procavia capensis 27.44 1.00e-38 154.00
IUUC-Ppe-101729 Prunus persica 85.83 0.00e+00 1731.00
IUUC-Pva-102450 Pteropus vampyrus 30.65 3.00e-53 203.00
IUUC-Pgr-103425 Puccinia graminis 27.62 3.00e-26 114.00
IUUC-Ptt-103985 Puccinia triticina 27.45 2.00e-26 115.00
IUUC-Pte-104148 Pyrenophora teres 26.08 5.00e-46 179.00
IUUC-Pyt-104663 Pyrenophora triticirepentis 26.70 4.00e-46 180.00
IUUC-Rno-105989 Rattus norvegicus 30.29 8.00e-57 215.00
IUUC-Sce-106352 Saccharomyces cerevisiae 30.67 1.00e-18 89.00
IUUC-Sha-107488 Sarcophilus harrisii 49.23 2.00e-16 79.00
IUUC-Sja-107820 Schizosaccharomyces japonicus 33.64 1.00e-23 105.00
IUUC-Spo-108307 Schizosaccharomyces pombe 23.26 4.00e-29 123.00
IUUC-Smo-109022 Selaginella moellendorffii 54.48 0.00e+00 881.00
IUUC-Sit-110338 Setaria italica 71.55 0.00e+00 1424.00
IUUC-Sly-111874 Solanum lycopersicum 83.43 0.00e+00 1684.00
IUUC-Stu-112495 Solanum tuberosum 83.24 0.00e+00 1686.00
IUUC-Sar-113497 Sorex araneus 41.86 1.00e-31 131.00
IUUC-Sbi-114728 Sorghum bicolor 69.13 0.00e+00 989.00
IUUC-Sre-115100 Sporisorium reilianum 25.05 7.00e-28 119.00
IUUC-Ssc-115407 Sus scrofa 30.47 6.00e-54 205.00
IUUC-Tgu-117016 Taeniopygia guttata 30.29 8.00e-56 211.00
IUUC-Tru-118345 Takifugu rubripes 31.73 6.00e-45 175.00
IUUC-Tsy-119470 Tarsius syrichta 28.98 2.00e-36 147.00
IUUC-Tni-119846 Tetraodon nigroviridis 27.42 4.00e-54 206.00
IUUC-Tca-121135 Theobroma cacao 88.73 0.00e+00 1771.00
IUUC-Tre-121940 Trichoderma reesei 24.88 2.00e-39 158.00
IUUC-Tvi-122339 Trichoderma virens 36.27 8.00e-32 132.00
IUUC-Tae-122752 Triticum aestivum 72.28 0.00e+00 1440.00
IUUC-Tur-126371 Triticum urartu 70.23 0.00e+00 658.00
IUUC-Tme-127133 Tuber melanosporum 26.81 2.00e-46 181.00
IUUC-Tbe-127567 Tupaia belangeri 47.69 3.00e-16 77.80
IUUC-Ttr-128802 Tursiops truncatus 28.24 4.00e-45 176.00
IUUC-Uma-129384 Ustilago maydis 23.31 1.00e-30 129.00
IUUC-Vda-130026 Verticillium dahliae 31.73 6.00e-32 133.00
IUUC-Vpa-130798 Vicugna pacos 30.95 4.00e-39 156.00
IUUC-Vvi-130911 Vitis vinifera 85.31 0.00e+00 1725.00
IUUC-Xtr-132891 Xenopus tropicalis 26.71 5.00e-49 189.00
IUUC-Xma-133659 Xiphophorus maculatus 30.73 4.00e-45 176.00
IUUC-Yli-134628 Yarrowia lipolytica 24.25 1.00e-41 164.00
IUUC-Zma-135318 Zea mays 69.83 0.00e+00 1407.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved