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Tag Content
UUCD2 ID IUUC-Dre-027874
UUCD1 version UUC-DaR-00164
Ensembl Protein ID ENSDARP00000023281.8
UniProt Accession B0S6A9; B0S6A9_DANRE
Genbank Protein ID ENSDARP00000023281
Protein Name WD repeat domain 3
Genbank Nucleotide ID BX470145
Gene Name wdr3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000011079.10 ENSDART00000003648.9 ENSDARP00000023281.8
ENSDARG00000011079.10 ENSDART00000147892.1 ENSDARP00000116100.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.30e-49 163.2 667 697
UBD/Beta-Prp 2.50e-94 316.8 544 700
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH  +v+cla  ++ +++vs+s+D+++++W+
   Q: 667  GHHREVWCLAIsPNgDHIVSSSHDKSLRLWE 697
           79999*******777***************8 PP
   

   UBD/Beta-Prp
   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++v++ v fspd++lla++  d t+k++ ++t k++ sl+gh+ +v ++++s+d+ +++tgs Dr++k+w l+ g+c +++ +h+dsv+
   Q: 544  EDVLC-VRFSPDQRLLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCLDISHDSALIATGSADRNVKIWGLDFGDCHRSMFAHDDSVM 631
           34555.*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
            l+f p+++ + ++++d+ i+ wd ++ + ++ tl+gh++ v+c++++p+g+ +vs+s D+ +rlW   +
   Q: 632  FLQFVPKTHLFFTAGKDKKIKQWDADKFEHIQ-TLEGHHREVWCLAISPNGDHIVSSSHDKSLRLWERTR 700
           ********************************.*********************************9833 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MGLTKQYLRY VASAVFGVIG SQKANIAFVT LRGGEKGRYV AVGACEHVFI WDVRKAEKVL 60
ILEGKKHEVT YLCPSPDGVH IAVGYEDGGV RIFSLLNGES NVSFSGHKSA VSVIKYDALG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-027874|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTTACAGGA TGTCACACAT GCGACTGGAA AGCATGTCGG AGTTCTCCCC ATCCACTGAA 60
GAAATACTTT CATAAGGACT GCAAATACAA AAGTCGTCTA ATTCACAAAA GTATGTAAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-027874|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF04003--Utp12
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000784 Aegilops tauschii 38.91 4.00e-147 515.00
IUUC-Aml-001245 Ailuropoda melanoleuca 70.61 0.00e+00 1290.00
IUUC-Atr-002700 Amborella trichopoda 39.39 2.00e-178 619.00
IUUC-Apl-004164 Anas platyrhynchos 68.06 0.00e+00 956.00
IUUC-Aca-004765 Anolis carolinensis 66.63 0.00e+00 1219.00
IUUC-Aly-006503 Arabidopsis lyrata 40.11 2.00e-173 603.00
IUUC-Ath-006848 Arabidopsis thaliana 40.51 5.00e-176 611.00
IUUC-Ago-007909 Ashbya gossypii 35.95 2.00e-162 566.00
IUUC-Acl-008238 Aspergillus clavatus 38.36 0.00e+00 644.00
IUUC-Afl-008544 Aspergillus flavus 37.74 0.00e+00 629.00
IUUC-Afu-008868 Aspergillus fumigatus 38.30 0.00e+00 642.00
IUUC-Ani-009367 Aspergillus nidulans 38.64 3.00e-176 612.00
IUUC-Ang-009732 Aspergillus niger 38.27 0.00e+00 640.00
IUUC-Aor-010140 Aspergillus oryzae 37.80 0.00e+00 631.00
IUUC-Ate-010572 Aspergillus terreus 37.55 3.00e-179 622.00
IUUC-Ame-010956 Astyanax mexicanus 89.64 0.00e+00 1012.00
IUUC-Bgr-012296 Blumeria graminis 36.93 3.00e-173 602.00
IUUC-Bta-012716 Bos taurus 69.84 0.00e+00 1280.00
IUUC-Bci-013699 Botrytis cinerea 36.49 2.00e-168 586.00
IUUC-Bdi-014525 Brachypodium distachyon 39.45 1.00e-164 573.00
IUUC-Bol-015117 Brassica oleracea 39.94 1.00e-170 593.00
IUUC-Bra-016869 Brassica rapa 39.89 2.00e-171 596.00
IUUC-Cel-018570 Caenorhabditis elegans 34.69 9.00e-132 464.00
IUUC-Cja-019425 Callithrix jacchus 70.92 0.00e+00 1296.00
IUUC-Cfa-020787 Canis familiaris 70.61 0.00e+00 1288.00
IUUC-Cpo-021729 Cavia porcellus 71.11 0.00e+00 955.00
IUUC-Cre-022678 Chlamydomonas reinhardtii 44.04 9.00e-102 365.00
IUUC-Csa-024098 Chlorocebus sabaeus 71.10 0.00e+00 1301.00
IUUC-Cho-024495 Choloepus hoffmanni 62.10 0.00e+00 702.00
IUUC-Cin-025245 Ciona intestinalis 48.45 2.00e-160 559.00
IUUC-Cgl-026708 Colletotrichum gloeosporioides 36.25 7.00e-171 594.00
IUUC-Cne-026835 Cryptococcus neoformans 46.46 7.00e-128 451.00
IUUC-Cme-027162 Cyanidioschyzon merolae 26.53 7.00e-34 139.00
IUUC-Dno-028905 Dasypus novemcinctus 70.30 0.00e+00 1280.00
IUUC-Dor-030383 Dipodomys ordii 64.78 3.00e-176 612.00
IUUC-Dse-031297 Dothistroma septosporum 35.70 4.00e-164 572.00
IUUC-Dme-031956 Drosophila melanogaster 42.80 0.00e+00 691.00
IUUC-Ete-032608 Echinops telfairi 63.53 0.00e+00 702.00
IUUC-Eca-034181 Equus caballus 69.21 0.00e+00 1267.00
IUUC-Eeu-034495 Erinaceus europaeus 71.11 0.00e+00 1244.00
IUUC-Fca-035994 Felis catus 71.04 0.00e+00 1211.00
IUUC-Fal-036611 Ficedula albicollis 67.71 0.00e+00 1219.00
IUUC-Fox-037807 Fusarium oxysporum 37.12 2.00e-174 606.00
IUUC-Fso-038090 Fusarium solani 36.46 2.00e-171 596.00
IUUC-Gmo-039018 Gadus morhua 72.95 0.00e+00 785.00
IUUC-Ggr-039748 Gaeumannomyces graminis 36.90 6.00e-176 611.00
IUUC-Gga-040707 Gallus gallus 70.16 0.00e+00 1236.00
IUUC-Gac-042334 Gasterosteus aculeatus 70.90 0.00e+00 744.00
IUUC-Gma-043033 Glycine max 38.29 5.00e-174 605.00
IUUC-Ggo-045334 Gorilla gorilla 68.93 0.00e+00 1276.00
IUUC-Hsa-046996 Homo sapiens 69.94 0.00e+00 1279.00
IUUC-Hvu-047381 Hordeum vulgare 34.22 2.00e-84 306.00
IUUC-Itr-047938 Ictidomys tridecemlineatus 70.54 0.00e+00 1271.00
IUUC-Kpa-049185 Komagataella pastoris 33.79 9.00e-149 521.00
IUUC-Lch-050098 Latimeria chalumnae 66.92 0.00e+00 1143.00
IUUC-Lpe-050710 Leersia perrieri 37.12 2.00e-156 546.00
IUUC-Loc-052745 Lepisosteus oculatus 75.48 0.00e+00 1339.00
IUUC-Lma-053104 Leptosphaeria maculans 37.01 5.00e-177 615.00
IUUC-Laf-054395 Loxodonta africana 70.96 0.00e+00 1274.00
IUUC-Mcc-055077 Macaca mulatta 71.20 0.00e+00 1293.00
IUUC-Meu-056418 Macropus eugenii 68.79 5.00e-176 611.00
IUUC-Mor-057031 Magnaporthe oryzae 36.66 4.00e-156 545.00
IUUC-Mpo-057420 Magnaporthe poae 36.72 7.00e-173 601.00
IUUC-Mtr-057838 Medicago truncatula 39.49 8.00e-177 614.00
IUUC-Mla-058854 Melampsora laricipopulina 41.78 6.00e-124 438.00
IUUC-Mga-060120 Meleagris gallopavo 65.87 0.00e+00 1142.00
IUUC-Mvi-060407 Microbotryum violaceum 44.79 8.00e-143 501.00
IUUC-Mmr-060635 Microcebus murinus 71.38 0.00e+00 1292.00
IUUC-Mdo-063023 Monodelphis domestica 71.56 0.00e+00 1298.00
IUUC-Mmu-064103 Mus musculus 69.52 0.00e+00 1276.00
IUUC-Mac-065569 Musa acuminata 39.02 2.00e-170 593.00
IUUC-Mpu-066462 Mustela putorius furo 70.79 0.00e+00 1296.00
IUUC-Mlu-067894 Myotis lucifugus 71.14 0.00e+00 1299.00
IUUC-Nfi-068321 Neosartorya fischeri 37.95 0.00e+00 629.00
IUUC-Ncr-068661 Neurospora crassa 36.52 4.00e-175 608.00
IUUC-Nle-069409 Nomascus leucogenys 69.73 0.00e+00 1281.00
IUUC-Opr-070445 Ochotona princeps 69.78 0.00e+00 811.00
IUUC-Ont-072339 Oreochromis niloticus 81.65 0.00e+00 1476.00
IUUC-Oan-073688 Ornithorhynchus anatinus 68.73 0.00e+00 1202.00
IUUC-Ocu-074227 Oryctolagus cuniculus 71.20 0.00e+00 1300.00
IUUC-Oba-075635 Oryza barthii 37.96 6.00e-151 528.00
IUUC-Obr-076897 Oryza brachyantha 39.01 1.00e-162 567.00
IUUC-Ogl-077555 Oryza glaberrima 37.85 1.00e-150 527.00
IUUC-Ogu-078724 Oryza glumaepatula 37.92 2.00e-151 530.00
IUUC-Oin-080030 Oryza indica 37.92 2.00e-150 526.00
IUUC-Olo-080687 Oryza longistaminata 36.02 2.00e-138 486.00
IUUC-Ome-081867 Oryza meridionalis 38.13 1.00e-151 530.00
IUUC-Oni-082559 Oryza nivara 37.92 2.00e-150 526.00
IUUC-Opu-083332 Oryza punctata 41.51 4.00e-145 509.00
IUUC-Oru-084455 Oryza rufipogon 37.92 2.00e-150 526.00
IUUC-Osa-085793 Oryza sativa 37.92 2.00e-150 526.00
IUUC-Ola-087395 Oryzias latipes 79.70 0.00e+00 1339.00
IUUC-Olu-087768 Ostreococcus lucimarinus 38.03 1.00e-157 550.00
IUUC-Oga-088574 Otolemur garnettii 71.67 0.00e+00 1303.00
IUUC-Oar-089453 Ovis aries 69.91 0.00e+00 1281.00
IUUC-Ptr-090694 Pan troglodytes 69.10 0.00e+00 1275.00
IUUC-Pan-092420 Papio anubis 70.92 0.00e+00 1289.00
IUUC-Psi-093683 Pelodiscus sinensis 70.86 0.00e+00 1260.00
IUUC-Pma-094197 Petromyzon marinus 57.64 3.00e-72 264.00
IUUC-Pno-094783 Phaeosphaeria nodorum 35.86 6.00e-176 611.00
IUUC-Ppa-095208 Physcomitrella patens 39.96 3.00e-175 609.00
IUUC-Pfo-096299 Poecilia formosa 81.02 0.00e+00 1500.00
IUUC-Pab-098706 Pongo abelii 70.71 0.00e+00 1281.00
IUUC-Pop-099275 Populus trichocarpa 39.89 5.00e-170 592.00
IUUC-Pca-100796 Procavia capensis 57.32 0.00e+00 904.00
IUUC-Ppe-101861 Prunus persica 39.06 2.00e-174 606.00
IUUC-Pva-103241 Pteropus vampyrus 65.99 0.00e+00 1146.00
IUUC-Pgr-103432 Puccinia graminis 43.87 2.00e-126 447.00
IUUC-Ptt-103742 Puccinia triticina 39.31 4.00e-112 399.00
IUUC-Pte-104069 Pyrenophora teres 36.80 1.00e-168 587.00
IUUC-Pyt-104650 Pyrenophora triticirepentis 36.15 7.00e-175 608.00
IUUC-Rno-105219 Rattus norvegicus 68.42 0.00e+00 1241.00
IUUC-Sce-106271 Saccharomyces cerevisiae 37.32 7.00e-169 588.00
IUUC-Sha-107550 Sarcophilus harrisii 70.15 0.00e+00 1280.00
IUUC-Sja-107664 Schizosaccharomyces japonicus 36.79 5.00e-160 558.00
IUUC-Spo-108239 Schizosaccharomyces pombe 35.99 1.00e-165 577.00
IUUC-Ssl-108626 Sclerotinia sclerotiorum 37.23 8.00e-178 617.00
IUUC-Smo-108974 Selaginella moellendorffii 39.98 2.00e-169 590.00
IUUC-Sit-110000 Setaria italica 41.86 5.00e-159 555.00
IUUC-Sly-111595 Solanum lycopersicum 38.62 6.00e-170 591.00
IUUC-Stu-112516 Solanum tuberosum 38.62 7.00e-169 588.00
IUUC-Sar-113195 Sorex araneus 64.80 0.00e+00 1039.00
IUUC-Sbi-114465 Sorghum bicolor 38.82 7.00e-162 564.00
IUUC-Sre-115006 Sporisorium reilianum 34.35 2.00e-144 506.00
IUUC-Ssc-115929 Sus scrofa 68.08 0.00e+00 1254.00
IUUC-Tgu-117282 Taeniopygia guttata 68.04 0.00e+00 1215.00
IUUC-Tru-118406 Takifugu rubripes 79.50 0.00e+00 1393.00
IUUC-Tsy-119170 Tarsius syrichta 70.25 0.00e+00 1280.00
IUUC-Tni-119721 Tetraodon nigroviridis 77.20 0.00e+00 1373.00
IUUC-Tca-121761 Theobroma cacao 39.72 3.00e-178 619.00
IUUC-Tre-121908 Trichoderma reesei 35.95 2.00e-172 599.00
IUUC-Tvi-122547 Trichoderma virens 36.76 2.00e-174 606.00
IUUC-Tae-125496 Triticum aestivum 38.34 5.00e-157 548.00
IUUC-Tur-126811 Triticum urartu 39.77 4.00e-158 552.00
IUUC-Tme-126987 Tuber melanosporum 37.81 8.00e-178 617.00
IUUC-Tbe-127315 Tupaia belangeri 75.70 0.00e+00 728.00
IUUC-Ttr-129165 Tursiops truncatus 62.47 0.00e+00 1066.00
IUUC-Uma-129651 Ustilago maydis 33.97 4.00e-146 512.00
IUUC-Vda-129973 Verticillium dahliae 37.08 6.00e-169 588.00
IUUC-Vpa-130163 Vicugna pacos 56.52 7.00e-145 508.00
IUUC-Vvi-131402 Vitis vinifera 38.98 2.00e-170 593.00
IUUC-Xtr-132296 Xenopus tropicalis 69.88 0.00e+00 1244.00
IUUC-Xma-133028 Xiphophorus maculatus 80.06 0.00e+00 1493.00
IUUC-Yli-134484 Yarrowia lipolytica 37.66 1.00e-157 550.00
IUUC-Zma-135938 Zea mays 38.35 1.00e-159 557.00
Created Date 25-Jun-2017

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