iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050098

Ensembl Protein ID

ENSLACP00000016188.1

UniProt Accession

H3B2R7; H3B2R7_LATCH

Genbank Protein ID

ENSLACP00000016188

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01107550

Gene Name

WDR3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000014259.1	ENSLACT00000016300.1	ENSLACP00000016188.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-36	123.4	589	628
UBD/Beta-Prp	7.90e-86	288.1	550	707

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+ +v c++   d tl+++Gs D ++k+W l  g++ ks
   Q: 589  GHKLPVLCMDIsYDsTLIATGSADRNVKIWGLEFGDCHKS 628
           79999***9888455********************99875 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ++v++ v +spd++lla++  d t+k++ ++t k++ sl+gh+ +v ++++s d+ +++tgs Dr++k+w l+ g+c  +l +h+dsv+
   Q: 550  EDVLC-VRYSPDQRLLAVSLLDCTVKLFYTDTLKFFLSLYGHKLPVLCMDISYDSTLIATGSADRNVKIWGLEFGDCHKSLFAHDDSVM 637
           34555.*********************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           sl+f p+++ + ++++dr i+ wd e+ + ++ tl+gh++ v++v+v+ +g+ +vs+s D+ +rlW   ++
   Q: 638  SLQFVPKTHLFFTAGKDRKIKQWDAEKFELIQ-TLEGHHQEVWTVAVSANGDHIVSSSHDKSLRLWERTRE 707
           ********************************.*********************************98443 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSLTKQYLRY AASAVFGVIG THRGNVVFVK LRGEKGRYVA VPACEHVFIW DVRKGEKSFT 60
LEQLNEKLEK IGGGGGGCHR KYFHTTFSIY NNNKLRSQDL YFNGHNGAIR SEKEKMGSLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTCTGA CCAAGCAGTA CCTGCGCTAT GCCGCTAGTG CTGTTTTCGG TGTGATCGGC 60
ACTCACAGGG GCAATGTGGT GTTCGTGAAG CTGCGAGGGG AGAAAGGGCG CTACGTGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.02	1.00e-132	467.00
IUUC-Aml-001245	Ailuropoda melanoleuca	67.85	0.00e+00	1208.00
IUUC-Atr-002700	Amborella trichopoda	37.62	5.00e-161	561.00
IUUC-Apl-004164	Anas platyrhynchos	63.65	0.00e+00	856.00
IUUC-Aca-004765	Anolis carolinensis	64.83	0.00e+00	1151.00
IUUC-Aly-006503	Arabidopsis lyrata	38.17	6.00e-167	581.00
IUUC-Ath-006848	Arabidopsis thaliana	37.18	5.00e-167	581.00
IUUC-Ago-007909	Ashbya gossypii	35.63	4.00e-145	508.00
IUUC-Acl-008238	Aspergillus clavatus	37.05	3.00e-172	598.00
IUUC-Afl-008544	Aspergillus flavus	37.49	1.00e-166	580.00
IUUC-Afu-008868	Aspergillus fumigatus	36.46	6.00e-172	598.00
IUUC-Ani-009367	Aspergillus nidulans	36.98	5.00e-162	565.00
IUUC-Ang-009732	Aspergillus niger	36.76	4.00e-172	598.00
IUUC-Aor-010140	Aspergillus oryzae	37.55	4.00e-167	582.00
IUUC-Ate-010572	Aspergillus terreus	36.73	1.00e-171	597.00
IUUC-Ame-010956	Astyanax mexicanus	60.23	0.00e+00	1047.00
IUUC-Bgr-012296	Blumeria graminis	34.74	1.00e-162	567.00
IUUC-Bta-012716	Bos taurus	67.49	0.00e+00	1218.00
IUUC-Bci-013699	Botrytis cinerea	34.47	2.00e-154	540.00
IUUC-Bdi-014525	Brachypodium distachyon	36.81	9.00e-146	511.00
IUUC-Bol-015117	Brassica oleracea	36.71	2.00e-162	566.00
IUUC-Bra-016869	Brassica rapa	37.88	2.00e-164	573.00
IUUC-Cel-018570	Caenorhabditis elegans	33.65	3.00e-123	436.00
IUUC-Cja-019425	Callithrix jacchus	67.96	0.00e+00	1222.00
IUUC-Cfa-020787	Canis familiaris	67.81	0.00e+00	1207.00
IUUC-Cpo-021729	Cavia porcellus	72.36	0.00e+00	962.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	45.12	4.00e-105	375.00
IUUC-Csa-024098	Chlorocebus sabaeus	68.07	0.00e+00	1219.00
IUUC-Cho-024495	Choloepus hoffmanni	62.40	0.00e+00	726.00
IUUC-Cin-025245	Ciona intestinalis	46.41	4.00e-140	491.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	35.77	1.00e-160	560.00
IUUC-Cne-026835	Cryptococcus neoformans	45.25	1.00e-132	467.00
IUUC-Cme-027162	Cyanidioschyzon merolae	24.70	9.00e-37	149.00
IUUC-Dre-027874	Danio rerio	67.24	0.00e+00	1217.00
IUUC-Dno-028905	Dasypus novemcinctus	67.38	0.00e+00	1210.00
IUUC-Dor-030383	Dipodomys ordii	60.00	1.00e-154	540.00
IUUC-Dse-031297	Dothistroma septosporum	33.13	9.00e-146	511.00
IUUC-Dme-031956	Drosophila melanogaster	39.39	0.00e+00	634.00
IUUC-Ete-032608	Echinops telfairi	63.91	0.00e+00	708.00
IUUC-Eca-034181	Equus caballus	68.28	0.00e+00	1211.00
IUUC-Eeu-034495	Erinaceus europaeus	67.45	0.00e+00	1165.00
IUUC-Fca-035994	Felis catus	69.15	0.00e+00	1150.00
IUUC-Fal-036611	Ficedula albicollis	65.77	0.00e+00	1146.00
IUUC-Fox-037807	Fusarium oxysporum	34.48	2.00e-162	566.00
IUUC-Fso-038090	Fusarium solani	35.62	9.00e-161	560.00
IUUC-Gmo-039018	Gadus morhua	56.48	2.00e-167	582.00
IUUC-Ggr-039748	Gaeumannomyces graminis	35.34	3.00e-162	565.00
IUUC-Gga-040707	Gallus gallus	66.85	0.00e+00	1148.00
IUUC-Gac-042334	Gasterosteus aculeatus	57.22	4.00e-163	568.00
IUUC-Gma-043033	Glycine max	38.42	2.00e-167	582.00
IUUC-Ggo-045334	Gorilla gorilla	68.28	0.00e+00	1220.00
IUUC-Hsa-046996	Homo sapiens	68.07	0.00e+00	1214.00
IUUC-Hvu-047381	Hordeum vulgare	32.34	3.00e-70	259.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	67.64	0.00e+00	1196.00
IUUC-Kpa-049185	Komagataella pastoris	32.65	9.00e-137	481.00
IUUC-Lpe-050710	Leersia perrieri	36.26	4.00e-144	505.00
IUUC-Loc-052745	Lepisosteus oculatus	64.29	0.00e+00	1109.00
IUUC-Lma-053104	Leptosphaeria maculans	35.83	4.00e-164	573.00
IUUC-Laf-054395	Loxodonta africana	66.74	0.00e+00	1190.00
IUUC-Mcc-055077	Macaca mulatta	68.18	0.00e+00	1214.00
IUUC-Meu-056418	Macropus eugenii	70.07	1.00e-179	623.00
IUUC-Mor-057031	Magnaporthe oryzae	35.62	2.00e-141	496.00
IUUC-Mpo-057420	Magnaporthe poae	35.65	1.00e-160	560.00
IUUC-Mtr-057838	Medicago truncatula	38.85	2.00e-169	589.00
IUUC-Mla-058854	Melampsora laricipopulina	34.28	7.00e-147	514.00
IUUC-Mga-060120	Meleagris gallopavo	63.43	0.00e+00	1059.00
IUUC-Mvi-060407	Microbotryum violaceum	44.18	5.00e-141	495.00
IUUC-Mmr-060635	Microcebus murinus	66.20	0.00e+00	1188.00
IUUC-Mdo-063023	Monodelphis domestica	65.95	0.00e+00	1189.00
IUUC-Mmu-064103	Mus musculus	66.81	0.00e+00	1202.00
IUUC-Mac-065569	Musa acuminata	36.88	5.00e-159	555.00
IUUC-Mpu-066462	Mustela putorius furo	68.46	0.00e+00	1223.00
IUUC-Mlu-067894	Myotis lucifugus	67.49	0.00e+00	1217.00
IUUC-Nfi-068321	Neosartorya fischeri	36.14	1.00e-167	583.00
IUUC-Ncr-068661	Neurospora crassa	34.47	2.00e-158	553.00
IUUC-Nle-069409	Nomascus leucogenys	68.18	0.00e+00	1217.00
IUUC-Opr-070445	Ochotona princeps	71.91	0.00e+00	816.00
IUUC-Ont-072339	Oreochromis niloticus	65.73	0.00e+00	1164.00
IUUC-Oan-073688	Ornithorhynchus anatinus	63.76	0.00e+00	1106.00
IUUC-Ocu-074227	Oryctolagus cuniculus	67.85	0.00e+00	1218.00
IUUC-Oba-075635	Oryza barthii	39.02	9.00e-140	491.00
IUUC-Obr-076897	Oryza brachyantha	37.10	7.00e-149	521.00
IUUC-Ogl-077555	Oryza glaberrima	38.90	1.00e-139	490.00
IUUC-Ogu-078724	Oryza glumaepatula	39.12	5.00e-140	491.00
IUUC-Oin-080030	Oryza indica	39.36	2.00e-139	490.00
IUUC-Olo-080687	Oryza longistaminata	36.95	9.00e-127	447.00
IUUC-Ome-081867	Oryza meridionalis	39.36	7.00e-140	491.00
IUUC-Oni-082559	Oryza nivara	39.36	2.00e-139	490.00
IUUC-Opu-083332	Oryza punctata	40.53	5.00e-138	484.00
IUUC-Oru-084455	Oryza rufipogon	39.36	9.00e-140	491.00
IUUC-Osa-085793	Oryza sativa	39.36	9.00e-140	491.00
IUUC-Ola-087395	Oryzias latipes	63.42	0.00e+00	1060.00
IUUC-Olu-087768	Ostreococcus lucimarinus	36.62	4.00e-146	512.00
IUUC-Oga-088574	Otolemur garnettii	67.49	0.00e+00	1209.00
IUUC-Oar-089453	Ovis aries	67.10	0.00e+00	1212.00
IUUC-Ptr-090694	Pan troglodytes	68.07	0.00e+00	1212.00
IUUC-Pan-092420	Papio anubis	68.18	0.00e+00	1219.00
IUUC-Psi-093683	Pelodiscus sinensis	67.49	0.00e+00	1193.00
IUUC-Pma-094197	Petromyzon marinus	45.22	1.00e-47	182.00
IUUC-Pno-094783	Phaeosphaeria nodorum	33.71	5.00e-155	541.00
IUUC-Ppa-095208	Physcomitrella patens	39.57	1.00e-158	553.00
IUUC-Pfo-096299	Poecilia formosa	65.63	0.00e+00	1184.00
IUUC-Pab-098706	Pongo abelii	68.18	0.00e+00	1211.00
IUUC-Pop-099275	Populus trichocarpa	37.47	2.00e-162	566.00
IUUC-Pca-100796	Procavia capensis	59.84	0.00e+00	838.00
IUUC-Ppe-101861	Prunus persica	38.61	2.00e-168	586.00
IUUC-Pva-103241	Pteropus vampyrus	64.49	0.00e+00	1058.00
IUUC-Pgr-103432	Puccinia graminis	42.33	1.00e-132	467.00
IUUC-Ptt-103742	Puccinia triticina	40.17	2.00e-116	413.00
IUUC-Pte-104069	Pyrenophora teres	35.20	2.00e-152	533.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	35.03	2.00e-159	556.00
IUUC-Rno-105219	Rattus norvegicus	66.52	0.00e+00	1177.00
IUUC-Sce-106271	Saccharomyces cerevisiae	35.66	2.00e-151	530.00
IUUC-Sha-107550	Sarcophilus harrisii	65.91	0.00e+00	1194.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	34.46	5.00e-146	511.00
IUUC-Spo-108239	Schizosaccharomyces pombe	35.06	1.00e-155	543.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	34.62	7.00e-163	567.00
IUUC-Smo-108974	Selaginella moellendorffii	38.75	1.00e-156	546.00
IUUC-Sit-110000	Setaria italica	39.38	5.00e-142	498.00
IUUC-Sly-111595	Solanum lycopersicum	38.92	3.00e-163	569.00
IUUC-Stu-112516	Solanum tuberosum	38.82	2.00e-162	566.00
IUUC-Sar-113195	Sorex araneus	68.93	0.00e+00	835.00
IUUC-Sbi-114465	Sorghum bicolor	36.10	2.00e-146	513.00
IUUC-Sre-115006	Sporisorium reilianum	31.62	8.00e-133	468.00
IUUC-Ssc-115929	Sus scrofa	66.77	0.00e+00	1183.00
IUUC-Tgu-117282	Taeniopygia guttata	65.87	0.00e+00	1140.00
IUUC-Tru-118406	Takifugu rubripes	63.41	0.00e+00	1110.00
IUUC-Tsy-119170	Tarsius syrichta	66.59	0.00e+00	1185.00
IUUC-Tni-119721	Tetraodon nigroviridis	64.13	0.00e+00	1084.00
IUUC-Tca-121761	Theobroma cacao	38.48	6.00e-170	591.00
IUUC-Tre-121908	Trichoderma reesei	35.38	4.00e-158	552.00
IUUC-Tvi-122547	Trichoderma virens	35.75	4.00e-159	555.00
IUUC-Tae-125496	Triticum aestivum	36.90	2.00e-144	506.00
IUUC-Tur-126811	Triticum urartu	40.29	1.00e-144	507.00
IUUC-Tme-126987	Tuber melanosporum	36.54	6.00e-171	594.00
IUUC-Tbe-127315	Tupaia belangeri	75.73	0.00e+00	714.00
IUUC-Ttr-129165	Tursiops truncatus	56.79	1.00e-156	546.00
IUUC-Uma-129651	Ustilago maydis	32.45	3.00e-139	489.00
IUUC-Vda-129973	Verticillium dahliae	36.30	1.00e-154	540.00
IUUC-Vpa-130163	Vicugna pacos	58.35	2.00e-132	466.00
IUUC-Vvi-131402	Vitis vinifera	37.90	8.00e-167	580.00
IUUC-Xtr-132296	Xenopus tropicalis	64.59	0.00e+00	1122.00
IUUC-Xma-133028	Xiphophorus maculatus	65.34	0.00e+00	1180.00
IUUC-Yli-134484	Yarrowia lipolytica	36.06	5.00e-144	505.00
IUUC-Zma-135938	Zea mays	38.92	7.00e-144	504.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence