iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022102

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02048264

Gene Name

STRN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000001053.3	ENSCPOT00000001063.2	ENSCPOP00000000950.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-28	96.6	549	581
UBD/Beta-Prp	4.10e-49	167.3	439	605

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d v++laf ++  +l+s+s Dgt+++WD++
   Q: 549  GHGDAVWGLAFsPTcQRLASCSADGTVRIWDPS 581
           8***********87899**************75 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdl 123
            +l +h ++++++ f+++++ l+t+seD+t+k+w+l+           + +++h+++gh   vl++++  ++++  sG++d  i+ w++
   Q: 439  FTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQkavtakknaalDVEPIHAFRGHRGPVLAVAVGTNSEYCYSGGADARIHSWKI 527
           4899**********************************************************************************999 PP
   S: 124  etgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtl.tgghtdsvyslsfd 189
           +                 +l+gh ++v++++++p+++ l+s+s+D+tvr+Wd  ++  +l t+ t   ++  +s++f+
   Q: 528  PDLNMDPYdgydpsvlshVLEGHGDAVWGLAFSPTCQRLASCSADGTVRIWDPsSSPACLCTFpTASEHGVPTSVAFT 605
           887666557899999999**********************************867899****9754456666777766 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MMEERAAAAV AAAASSCRPL GSATGPGPTG TVPVSGPVPG PSPAGKGGGG GGSPGPAGGP 60
EPLSLPGILH FIQHEWARFE AEKARWEAER AELQAQVAFL QGERKGQENL KTDLVRRIKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGAGG AGCGAGCGGC CGCCGCGGTC GCCGCTGCAG CCTCCTCCTG CCGCCCGCTC 60
GGCTCCGCGA CGGGTCCCGG CCCGACTGGG ACGGTCCCAG TCTCAGGCCC TGTCCCCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001946	Ailuropoda melanoleuca	80.69	0.00e+00	998.00
IUUC-Aca-004552	Anolis carolinensis	78.42	0.00e+00	1020.00
IUUC-Acl-008170	Aspergillus clavatus	26.15	8.00e-28	119.00
IUUC-Ate-010457	Aspergillus terreus	26.63	1.00e-29	125.00
IUUC-Ame-010825	Astyanax mexicanus	53.75	2.00e-173	602.00
IUUC-Bgr-012143	Blumeria graminis	25.67	8.00e-34	139.00
IUUC-Bta-012550	Bos taurus	91.48	0.00e+00	1066.00
IUUC-Cja-018978	Callithrix jacchus	91.71	0.00e+00	940.00
IUUC-Cfa-020268	Canis familiaris	93.54	0.00e+00	1086.00
IUUC-Csa-023969	Chlorocebus sabaeus	93.95	0.00e+00	1162.00
IUUC-Cne-026783	Cryptococcus neoformans	33.06	3.00e-57	216.00
IUUC-Dre-027638	Danio rerio	62.24	0.00e+00	825.00
IUUC-Dno-029256	Dasypus novemcinctus	95.62	0.00e+00	657.00
IUUC-Dor-031032	Dipodomys ordii	91.30	0.00e+00	1111.00
IUUC-Dme-032158	Drosophila melanogaster	44.98	5.00e-162	564.00
IUUC-Ete-033031	Echinops telfairi	77.24	6.00e-157	547.00
IUUC-Eca-033515	Equus caballus	93.40	0.00e+00	1105.00
IUUC-Eeu-035033	Erinaceus europaeus	79.02	1.00e-126	446.00
IUUC-Fca-035749	Felis catus	91.93	0.00e+00	1051.00
IUUC-Gmo-039274	Gadus morhua	60.48	0.00e+00	790.00
IUUC-Gac-042099	Gasterosteus aculeatus	61.03	0.00e+00	802.00
IUUC-Ggo-045406	Gorilla gorilla	94.71	0.00e+00	1120.00
IUUC-Hsa-046341	Homo sapiens	93.95	0.00e+00	1124.00
IUUC-Itr-048200	Ictidomys tridecemlineatus	95.35	0.00e+00	1113.00
IUUC-Lch-049604	Latimeria chalumnae	62.73	0.00e+00	818.00
IUUC-Loc-052671	Lepisosteus oculatus	60.77	0.00e+00	830.00
IUUC-Laf-054531	Loxodonta africana	94.94	0.00e+00	1039.00
IUUC-Mcc-055737	Macaca mulatta	89.43	0.00e+00	1105.00
IUUC-Meu-056845	Macropus eugenii	86.94	0.00e+00	1030.00
IUUC-Mmr-061153	Microcebus murinus	94.21	0.00e+00	1172.00
IUUC-Mdo-062739	Monodelphis domestica	81.91	0.00e+00	967.00
IUUC-Mmu-063564	Mus musculus	93.68	0.00e+00	1132.00
IUUC-Mpu-065794	Mustela putorius furo	91.90	0.00e+00	1009.00
IUUC-Nfi-068560	Neosartorya fischeri	25.91	1.00e-27	118.00
IUUC-Nle-069587	Nomascus leucogenys	86.02	0.00e+00	988.00
IUUC-Opr-071219	Ochotona princeps	73.75	0.00e+00	824.00
IUUC-Ont-071528	Oreochromis niloticus	57.03	0.00e+00	783.00
IUUC-Ocu-073953	Oryctolagus cuniculus	91.09	0.00e+00	960.00
IUUC-Ola-086888	Oryzias latipes	61.58	2.00e-155	543.00
IUUC-Oga-088280	Otolemur garnettii	95.20	0.00e+00	1150.00
IUUC-Oar-090381	Ovis aries	88.04	0.00e+00	983.00
IUUC-Ptr-090704	Pan troglodytes	90.39	0.00e+00	1066.00
IUUC-Pan-092058	Papio anubis	93.95	0.00e+00	1161.00
IUUC-Psi-093535	Pelodiscus sinensis	73.47	0.00e+00	690.00
IUUC-Pfo-096556	Poecilia formosa	60.70	0.00e+00	807.00
IUUC-Pab-098573	Pongo abelii	94.74	0.00e+00	1096.00
IUUC-Pca-100746	Procavia capensis	90.09	0.00e+00	988.00
IUUC-Pva-102823	Pteropus vampyrus	94.30	0.00e+00	1101.00
IUUC-Rno-105418	Rattus norvegicus	94.86	0.00e+00	1129.00
IUUC-Ssc-116050	Sus scrofa	93.30	0.00e+00	886.00
IUUC-Tru-117971	Takifugu rubripes	61.23	0.00e+00	812.00
IUUC-Tni-120522	Tetraodon nigroviridis	61.85	0.00e+00	835.00
IUUC-Tbe-128127	Tupaia belangeri	94.96	0.00e+00	633.00
IUUC-Ttr-128911	Tursiops truncatus	86.79	0.00e+00	1013.00
IUUC-Vda-129673	Verticillium dahliae	24.69	3.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence