iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095946

Ensembl Protein ID

PP1S133_46V6.1

UniProt Accession

A9TRM7; A9TRM7_PHYPA

Genbank Protein ID

EDQ53941.1

Protein Name

BAH-PHD domain-containing protein

Genbank Nucleotide ID

DS545187

Gene Name

EBP1501; PHYPADRAFT_149469

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S133_46V6	PP1S133_46V6.1	PP1S133_46V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.60e-08	34.7	95	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC  C+ +++ +  +v+Ce+C++wfHp C+  +  +++++ ek+ Cp+C+s
   Q: 95   VCCKCEMPYNPDGLMVQCEICKDWFHPSCMRFT-PNQVKKMEKFVCPDCTS 144
           7889999999999********************.888888888******87 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRGQDPGKPP YVAKIEKIET DSKRNAKVRV RWYYRPEESV GDHYDIQSTD TTEGKFKVHK 60
FKNHTKLESV GTEDYFCRFE YKASTGAFSP DRVAVCCKCE MPYNPDGLMV QCEICKDWFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCGGGC AAGATCCGGG TAAACCACCC TACGTTGCCA AGATAGAGAA AATTGAAACC 60
GACAGCAAAA GAAACGCCAA GGTCCGTGTG CGATGGTATT ATCGGCCGGA AGAGTCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0016021--C:integral component of membrane
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

ppp:PHYPADRAFT_149469

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Kpa-049245	Komagataella pastoris	40.43	4.00e-06	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence