iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121617

Ensembl Protein ID

EOY04210

UniProt Accession

A0A061EGV6; A0A061EGV6_THECC

Genbank Protein ID

EOY04210.1

Protein Name

Rad23 UV excision repair protein family isoform 1

Genbank Nucleotide ID

CM001882

Gene Name

TCM_019468

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_019468	EOY04211	EOY04211
TCM_019468	EOY04210	EOY04210

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.20e-23	82.1	263	303
ULD/UDP/UBQ/UBQ_PIM	6.10e-25	87.9	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           e +++q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 263  EAIIQQILDMGggsWDRDTVVRALRAAYNNPERAVEYLYSG 303
           668***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk++vktlkg++fe+ev+++dtv+++K++i + +g   +p++qq LI++Gk+LkD+ttL ++++ ++s+++++++k+k
   Q: 1    MKIFVKTLKGTHFEIEVKPEDTVADVKKNIDTAQGpdiYPAAQQMLIHQGKVLKDNTTLDDNKVAENSFIVIMLTKNK 78
           99*************************************************************************986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MKIFVKTLKG THFEIEVKPE DTVADVKKNI DTAQGPDIYP AAQQMLIHQG KVLKDNTTLD 60
DNKVAENSFI VIMLTKNKVS SSGASTASTT SAPTSQLPDK VLNILEFLLM HAWLIILEKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGACCATT CTATTCAACG TTTTGTACTA TTAAAATAAT TTAAAGAAAA TAATTGTTTC 60
CAGTTGGGTG TAGCAAATAC AAAAGTGCCG CGTGCGTCCA AAAAATAAAA AAAAAAAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cgl-026495	Colletotrichum gloeosporioides	47.37	3.00e-17	82.00
IUUC-Ggr-040116	Gaeumannomyces graminis	49.21	3.00e-21	95.10
IUUC-Mor-057287	Magnaporthe oryzae	49.58	1.00e-18	87.00
IUUC-Mpo-057609	Magnaporthe poae	49.19	5.00e-21	94.00
IUUC-Pno-095064	Phaeosphaeria nodorum	45.54	1.00e-14	73.60
IUUC-Tme-127092	Tuber melanosporum	47.73	7.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence