iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131121

UUCD1 version

UUC-ViV-00928

Ensembl Protein ID

VIT_00s0214g00020.t01

UniProt Accession

F6I202; F6I202_VITVI

Genbank Protein ID

CCB60969.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596523

Gene Name

VIT_00s0214g00020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0214g00020	VIT_00s0214g00020.t01	VIT_00s0214g00020.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-09	38.9	100	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           gH+++v ++a   s++ l++ + D ++ vWD+++ 
   Q: 100  GHEGPVMGMACdaSGGELATVGADRKVLVWDVDEA 134
           8**********987799**************9765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASWALKKNY RSATTLHQFY TGGSFAIASD GSFIVCARDD AIKIVDSSNA AIRSAVEDDS 60
QIVTTLALSP DDILLFSSSH SRQIRVWKLS SLTCIRPWRG HEGPVMGMAC DASGGELATV 120

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Nucleotide Sequence
(Fasta)

TGCCTCATTT TCCAACCCAT TTCTTTCTCA TTCCACCATT AAACCCATTT CTCTCACTAT 60
CTTCCACTAT CCATCCCACT AATCATAACC CATACCTTTC TTTCATACCT ACCAAACCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence