iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006424

Ensembl Protein ID

fgenesh1_pg.C_scaffold_2001237

UniProt Accession

D7KWW8; D7KWW8_ARALL

Genbank Protein ID

EFH64952.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_339138

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_2001237	fgenesh1_pg.C_scaffold_2001237	fgenesh1_pg.C_scaffold_2001237

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-21	75.1	245	319

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++++f+Cp+++e+M dPv++++G+t +r+++ +w++s g+     cPvt+q+l  ++l  n +l+ +iq+w  +n+
   Q: 245  PYQAFICPLTKEIMDDPVTTETGVTCERQAVIEWFDSFGNsdeiNCPVTGQKL-TTELSENVVLKTIIQEWKVRNE 319
           5799*******************************988888889*********.789**************99986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEIQTAESNV VCSIDIFESL SDSVDVAKNL VEKSQESNGA ESTTDLRSIE AGFEGVVKQM 60
GETLQSIPES TFDEEEYIGV VIQSLSNEMQ NANIGDGSKS EMIQNGQQKI SAKHSPEIVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATAC AGACAGCAGA GAGCAACGTC GTATGTTCAA TTGATATTTT TGAATCACTA 60
TCCGATAGTG TAGATGTGGC CAAGAATCTG GTTGAGAAAT CTCAAGAAAG TAACGGAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_339138

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	41.29	0.00e+00	644.00
IUUC-Atr-002664	Amborella trichopoda	46.09	0.00e+00	643.00
IUUC-Ath-006596	Arabidopsis thaliana	96.09	0.00e+00	1907.00
IUUC-Bdi-014572	Brachypodium distachyon	44.98	0.00e+00	670.00
IUUC-Bol-016179	Brassica oleracea	84.11	0.00e+00	1758.00
IUUC-Bra-017617	Brassica rapa	84.57	0.00e+00	1707.00
IUUC-Hvu-047634	Hordeum vulgare	44.39	0.00e+00	645.00
IUUC-Lpe-051636	Leersia perrieri	43.43	1.00e-164	573.00
IUUC-Mac-065538	Musa acuminata	47.46	0.00e+00	680.00
IUUC-Oba-075004	Oryza barthii	38.21	0.00e+00	681.00
IUUC-Obr-076391	Oryza brachyantha	43.47	3.00e-174	605.00
IUUC-Ogl-077375	Oryza glaberrima	38.21	0.00e+00	681.00
IUUC-Ogu-078488	Oryza glumaepatula	38.30	0.00e+00	685.00
IUUC-Oin-079369	Oryza indica	43.13	0.00e+00	669.00
IUUC-Olo-080998	Oryza longistaminata	43.26	0.00e+00	644.00
IUUC-Ome-081243	Oryza meridionalis	38.11	0.00e+00	674.00
IUUC-Oni-082268	Oryza nivara	38.30	0.00e+00	685.00
IUUC-Opu-083582	Oryza punctata	43.87	0.00e+00	637.00
IUUC-Oru-084387	Oryza rufipogon	38.21	0.00e+00	685.00
IUUC-Osa-086255	Oryza sativa	43.13	0.00e+00	670.00
IUUC-Pop-099505	Populus trichocarpa	59.53	0.00e+00	940.00
IUUC-Ppe-101776	Prunus persica	51.99	0.00e+00	966.00
IUUC-Sit-110498	Setaria italica	44.55	0.00e+00	641.00
IUUC-Sly-111047	Solanum lycopersicum	54.30	0.00e+00	871.00
IUUC-Stu-112113	Solanum tuberosum	45.66	0.00e+00	869.00
IUUC-Sbi-114808	Sorghum bicolor	45.12	0.00e+00	664.00
IUUC-Tca-121365	Theobroma cacao	56.31	0.00e+00	1066.00
IUUC-Tae-123677	Triticum aestivum	44.36	2.00e-180	625.00
IUUC-Tur-126161	Triticum urartu	44.00	6.00e-179	620.00
IUUC-Vvi-131502	Vitis vinifera	58.39	0.00e+00	931.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence