iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tvi-122442

Ensembl Protein ID

EHK16486

UniProt Accession

G9N965; G9N965_HYPVG

Genbank Protein ID

EHK16486.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

ABDF02000090

Gene Name

TIF34; TRIVIDRAFT_82783

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIVIDRAFT_82783	EHK16486	EHK16486

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-22	77.0	50	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH + ++ ++  ++ t+++sGs D+ti++W+++tg++lk+
   Q: 50   GHVGAIWTVDVdPTsTYIASGSADNTIRMWEVKTGKCLKT 89
           89999****99*777**********************986 PP

Organism

Trichoderma virens

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLAGHE RALTQIKYNL DGDLIFSVAK DQQICVWFSH NGERLGTYHG HVGAIWTVDV 60
DPTSTYIASG SADNTIRMWE VKTGKCLKTW EFPTAVKRVE FNEDGTKLLG VTEKRMGYLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCTGATT ATTTCCTCAG CCTTCCAGCA TCAGGATCAC CAGCCAAAAT GAGACCCATT 60
CTTCTTGCCG GGCACGAGCG TGCTCTCACC CAGATCAAGT ACGTCGCTGC CGAGGGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0002188--P:translation reinitiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	51.35	1.00e-29	122.00
IUUC-Aml-001321	Ailuropoda melanoleuca	50.76	1.00e-95	340.00
IUUC-Atr-002468	Amborella trichopoda	46.11	3.00e-47	179.00
IUUC-Apl-003841	Anas platyrhynchos	51.07	3.00e-96	343.00
IUUC-Aca-005123	Anolis carolinensis	51.22	8.00e-97	345.00
IUUC-Aly-005473	Arabidopsis lyrata	43.90	6.00e-76	275.00
IUUC-Ath-007094	Arabidopsis thaliana	43.77	1.00e-75	275.00
IUUC-Ago-008000	Ashbya gossypii	51.34	1.00e-99	354.00
IUUC-Acl-008098	Aspergillus clavatus	72.35	2.00e-147	513.00
IUUC-Afl-008494	Aspergillus flavus	73.73	7.00e-152	528.00
IUUC-Afu-009080	Aspergillus fumigatus	73.24	1.00e-149	520.00
IUUC-Ani-009230	Aspergillus nidulans	73.51	1.00e-150	523.00
IUUC-Aor-010114	Aspergillus oryzae	73.73	7.00e-152	528.00
IUUC-Ate-010285	Aspergillus terreus	73.21	8.00e-151	524.00
IUUC-Ame-011534	Astyanax mexicanus	50.61	5.00e-97	345.00
IUUC-Bgr-012121	Blumeria graminis	74.25	9.00e-148	514.00
IUUC-Bta-013143	Bos taurus	50.91	4.00e-96	342.00
IUUC-Bci-013950	Botrytis cinerea	78.85	4.00e-163	565.00
IUUC-Bdi-015019	Brachypodium distachyon	45.99	4.00e-81	293.00
IUUC-Bol-015709	Brassica oleracea	43.47	6.00e-73	266.00
IUUC-Bra-017760	Brassica rapa	43.50	3.00e-73	268.00
IUUC-Cel-018226	Caenorhabditis elegans	41.99	2.00e-75	274.00
IUUC-Cja-019741	Callithrix jacchus	50.91	3.00e-96	343.00
IUUC-Cfa-021204	Canis familiaris	50.76	3.00e-95	340.00
IUUC-Cpo-021661	Cavia porcellus	50.76	6.00e-96	342.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	43.79	2.00e-76	277.00
IUUC-Csa-024038	Chlorocebus sabaeus	50.91	3.00e-96	343.00
IUUC-Cin-025597	Ciona intestinalis	48.05	1.00e-90	324.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	84.78	2.00e-175	606.00
IUUC-Cne-026838	Cryptococcus neoformans	52.44	3.00e-100	356.00
IUUC-Cme-027304	Cyanidioschyzon merolae	40.79	1.00e-66	244.00
IUUC-Dre-028567	Danio rerio	50.46	8.00e-95	338.00
IUUC-Dno-029171	Dasypus novemcinctus	50.76	6.00e-95	339.00
IUUC-Dor-030257	Dipodomys ordii	41.81	3.00e-35	140.00
IUUC-Dse-031191	Dothistroma septosporum	71.26	1.00e-140	490.00
IUUC-Dme-031879	Drosophila melanogaster	45.12	2.00e-83	300.00
IUUC-Ete-032336	Echinops telfairi	45.19	7.00e-49	185.00
IUUC-Eca-033259	Equus caballus	50.76	2.00e-95	340.00
IUUC-Eeu-035153	Erinaceus europaeus	42.67	3.00e-28	117.00
IUUC-Fca-036489	Felis catus	50.76	2.00e-95	340.00
IUUC-Fal-037485	Ficedula albicollis	51.07	1.00e-96	344.00
IUUC-Fox-037860	Fusarium oxysporum	89.91	0.00e+00	648.00
IUUC-Fso-038188	Fusarium solani	90.50	0.00e+00	626.00
IUUC-Gmo-039311	Gadus morhua	50.61	8.00e-95	338.00
IUUC-Ggr-040045	Gaeumannomyces graminis	80.95	2.00e-169	586.00
IUUC-Gga-040645	Gallus gallus	50.15	8.00e-95	338.00
IUUC-Gac-042086	Gasterosteus aculeatus	50.00	4.00e-93	332.00
IUUC-Gma-043246	Glycine max	45.26	2.00e-78	284.00
IUUC-Ggo-045578	Gorilla gorilla	50.91	3.00e-96	343.00
IUUC-Hsa-046734	Homo sapiens	50.91	3.00e-96	343.00
IUUC-Hvu-047553	Hordeum vulgare	46.48	4.00e-81	292.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	50.46	4.00e-95	339.00
IUUC-Kpa-049325	Komagataella pastoris	52.85	9.00e-107	378.00
IUUC-Lch-049620	Latimeria chalumnae	50.17	8.00e-85	305.00
IUUC-Lpe-051338	Leersia perrieri	45.08	2.00e-73	267.00
IUUC-Loc-052094	Lepisosteus oculatus	45.62	7.00e-82	295.00
IUUC-Lma-053047	Leptosphaeria maculans	72.67	4.00e-149	518.00
IUUC-Laf-053801	Loxodonta africana	50.62	2.00e-93	333.00
IUUC-Mcc-055498	Macaca mulatta	45.26	3.00e-77	280.00
IUUC-Meu-056729	Macropus eugenii	47.56	3.00e-85	306.00
IUUC-Mor-057025	Magnaporthe oryzae	78.93	1.00e-165	573.00
IUUC-Mpo-057511	Magnaporthe poae	82.14	4.00e-170	588.00
IUUC-Mtr-058051	Medicago truncatula	45.71	1.00e-78	285.00
IUUC-Mla-059061	Melampsora laricipopulina	54.18	7.00e-102	362.00
IUUC-Mga-059229	Meleagris gallopavo	50.46	8.00e-94	335.00
IUUC-Mvi-060399	Microbotryum violaceum	53.92	4.00e-102	362.00
IUUC-Mmr-060764	Microcebus murinus	50.91	1.00e-96	344.00
IUUC-Mdo-062088	Monodelphis domestica	50.00	2.00e-93	333.00
IUUC-Mmu-064304	Mus musculus	50.76	3.00e-96	343.00
IUUC-Mac-065520	Musa acuminata	45.94	3.00e-78	283.00
IUUC-Mpu-066340	Mustela putorius furo	50.76	2.00e-95	340.00
IUUC-Mlu-067111	Myotis lucifugus	50.76	1.00e-95	341.00
IUUC-Nfi-068478	Neosartorya fischeri	73.24	7.00e-150	521.00
IUUC-Ncr-068820	Neurospora crassa	82.20	2.00e-173	599.00
IUUC-Nle-069903	Nomascus leucogenys	50.76	8.00e-96	341.00
IUUC-Opr-070221	Ochotona princeps	50.46	6.00e-95	338.00
IUUC-Ont-071765	Oreochromis niloticus	50.30	4.00e-95	339.00
IUUC-Oan-073660	Ornithorhynchus anatinus	48.14	6.00e-81	292.00
IUUC-Ocu-074039	Oryctolagus cuniculus	50.76	1.00e-95	340.00
IUUC-Oba-075395	Oryza barthii	39.94	6.00e-62	229.00
IUUC-Obr-076334	Oryza brachyantha	43.33	3.00e-71	260.00
IUUC-Ogl-077060	Oryza glaberrima	45.73	5.00e-77	279.00
IUUC-Ogu-078207	Oryza glumaepatula	46.20	3.00e-79	286.00
IUUC-Oin-079878	Oryza indica	45.57	2.00e-78	284.00
IUUC-Olo-080677	Oryza longistaminata	39.58	6.00e-70	256.00
IUUC-Ome-081228	Oryza meridionalis	35.66	1.00e-31	128.00
IUUC-Oni-082411	Oryza nivara	39.39	3.00e-61	226.00
IUUC-Opu-083136	Oryza punctata	45.29	5.00e-78	282.00
IUUC-Oru-084916	Oryza rufipogon	45.00	1.00e-76	278.00
IUUC-Osa-085454	Oryza sativa	45.57	2.00e-78	284.00
IUUC-Ola-087053	Oryzias latipes	50.61	1.00e-95	340.00
IUUC-Olu-087602	Ostreococcus lucimarinus	46.91	7.00e-86	308.00
IUUC-Oga-088154	Otolemur garnettii	50.76	9.00e-96	341.00
IUUC-Oar-089915	Ovis aries	50.76	2.00e-95	340.00
IUUC-Ptr-091124	Pan troglodytes	43.34	3.00e-73	266.00
IUUC-Pan-092035	Papio anubis	50.91	3.00e-96	343.00
IUUC-Psi-094096	Pelodiscus sinensis	50.23	7.00e-60	221.00
IUUC-Pno-094988	Phaeosphaeria nodorum	65.88	1.00e-126	444.00
IUUC-Ppa-095536	Physcomitrella patens	47.68	7.00e-83	298.00
IUUC-Pfo-096101	Poecilia formosa	49.70	4.00e-94	336.00
IUUC-Pab-097726	Pongo abelii	50.91	3.00e-96	343.00
IUUC-Pop-099617	Populus trichocarpa	45.85	2.00e-80	290.00
IUUC-Pca-101014	Procavia capensis	50.91	2.00e-96	343.00
IUUC-Ppe-101320	Prunus persica	44.95	5.00e-78	282.00
IUUC-Pva-102789	Pteropus vampyrus	45.26	8.00e-81	291.00
IUUC-Pgr-103479	Puccinia graminis	52.66	6.00e-103	365.00
IUUC-Ptt-103981	Puccinia triticina	52.07	8.00e-102	361.00
IUUC-Pte-104278	Pyrenophora teres	71.39	1.00e-143	500.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	71.39	1.00e-143	500.00
IUUC-Rno-105867	Rattus norvegicus	45.54	9.00e-77	278.00
IUUC-Sce-106251	Saccharomyces cerevisiae	53.12	1.00e-104	371.00
IUUC-Sha-107039	Sarcophilus harrisii	49.85	1.00e-93	334.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	62.50	2.00e-126	443.00
IUUC-Spo-108314	Schizosaccharomyces pombe	62.20	7.00e-125	438.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	78.55	9.00e-163	564.00
IUUC-Smo-108728	Selaginella moellendorffii	44.89	7.00e-79	285.00
IUUC-Sit-110801	Setaria italica	45.87	1.00e-81	295.00
IUUC-Sly-111326	Solanum lycopersicum	46.48	1.00e-80	291.00
IUUC-Stu-112458	Solanum tuberosum	46.48	1.00e-79	288.00
IUUC-Sbi-114063	Sorghum bicolor	46.46	9.00e-82	295.00
IUUC-Sre-115096	Sporisorium reilianum	58.43	2.00e-102	363.00
IUUC-Ssc-116080	Sus scrofa	50.91	3.00e-96	343.00
IUUC-Tgu-116988	Taeniopygia guttata	51.07	1.00e-96	344.00
IUUC-Tru-118766	Takifugu rubripes	50.30	3.00e-95	339.00
IUUC-Tni-120197	Tetraodon nigroviridis	50.30	1.00e-95	340.00
IUUC-Tca-121316	Theobroma cacao	47.09	2.00e-80	290.00
IUUC-Tre-122097	Trichoderma reesei	98.22	0.00e+00	691.00
IUUC-Tae-125800	Triticum aestivum	45.00	2.00e-80	291.00
IUUC-Tur-126334	Triticum urartu	39.26	2.00e-61	227.00
IUUC-Tme-127038	Tuber melanosporum	70.48	2.00e-143	500.00
IUUC-Ttr-128659	Tursiops truncatus	47.71	5.00e-77	279.00
IUUC-Uma-129464	Ustilago maydis	58.56	4.00e-102	362.00
IUUC-Vda-129841	Verticillium dahliae	86.49	3.00e-180	622.00
IUUC-Vvi-131076	Vitis vinifera	46.32	6.00e-80	288.00
IUUC-Xtr-132395	Xenopus tropicalis	52.91	4.00e-99	352.00
IUUC-Xma-133383	Xiphophorus maculatus	49.70	4.00e-94	335.00
IUUC-Yli-134586	Yarrowia lipolytica	60.84	8.00e-113	398.00
IUUC-Zma-135904	Zea mays	47.08	5.00e-82	296.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence