iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080258

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN542280.1_FG002	KN542280.1_FGT002	KN542280.1_FGP002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	31.3	223	263

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cle++  +++ ++  C H++h++C++ w        ++++CP+C
   Q: 223  CPTCLEEYtpDNPKIIAKCSHHYHLSCIYEW------MERSDTCPIC 263
           ******998777444566*************......********** PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAAGEEEDGG GRRQLTAGAA IPASSSGDQL MEKLKRELPI ANKRSLVRFF QKRKESEPWE 60
DFAVASALTI SRSTLIQITL SIGKYTATFQ RLESRPSNPA QGAAPLASTN PSTNITDNSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCCG GCGAGGAGGA GGACGGCGGC GGCCGGCGGC AGTTGACGGC GGGGGCGGCG 60
ATACCGGCAA GCAGCAGCGG CGACCAGCTG ATGGAGAAGC TAAAGCGAGG TAAGTAGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003101	Amborella trichopoda	55.98	2.00e-49	187.00
IUUC-Aly-005799	Arabidopsis lyrata	42.54	4.00e-36	143.00
IUUC-Bdi-014305	Brachypodium distachyon	85.94	8.00e-99	352.00
IUUC-Bol-015279	Brassica oleracea	40.80	2.00e-36	144.00
IUUC-Bra-017382	Brassica rapa	38.89	2.00e-36	144.00
IUUC-Cre-022854	Chlamydomonas reinhardtii	59.26	3.00e-19	85.10
IUUC-Gma-043590	Glycine max	50.98	3.00e-46	177.00
IUUC-Hvu-047238	Hordeum vulgare	83.85	4.00e-97	346.00
IUUC-Lpe-050881	Leersia perrieri	96.86	2.00e-110	390.00
IUUC-Mtr-058320	Medicago truncatula	50.00	1.00e-45	175.00
IUUC-Mac-065567	Musa acuminata	63.40	2.00e-67	247.00
IUUC-Oba-075350	Oryza barthii	99.08	1.00e-128	450.00
IUUC-Obr-076662	Oryza brachyantha	96.35	3.00e-101	359.00
IUUC-Ogl-076952	Oryza glaberrima	97.92	4.00e-111	392.00
IUUC-Ogu-078019	Oryza glumaepatula	99.08	2.00e-128	450.00
IUUC-Oin-079155	Oryza indica	97.92	4.00e-111	392.00
IUUC-Ome-081642	Oryza meridionalis	97.83	7.00e-106	375.00
IUUC-Oni-082523	Oryza nivara	98.62	4.00e-128	449.00
IUUC-Opu-083941	Oryza punctata	95.83	9.00e-110	387.00
IUUC-Oru-084804	Oryza rufipogon	98.18	1.00e-128	451.00
IUUC-Osa-085985	Oryza sativa	97.92	4.00e-111	392.00
IUUC-Olu-087706	Ostreococcus lucimarinus	35.77	1.00e-15	74.30
IUUC-Pma-094527	Petromyzon marinus	33.96	2.00e-07	49.70
IUUC-Ppa-095246	Physcomitrella patens	41.88	6.00e-29	119.00
IUUC-Pop-099886	Populus trichocarpa	54.64	2.00e-55	207.00
IUUC-Ppe-101954	Prunus persica	50.67	1.00e-56	211.00
IUUC-Smo-109167	Selaginella moellendorffii	68.75	2.00e-18	82.00
IUUC-Sit-109989	Setaria italica	87.50	4.00e-99	352.00
IUUC-Sly-111103	Solanum lycopersicum	55.86	7.00e-40	155.00
IUUC-Stu-112362	Solanum tuberosum	80.33	2.00e-28	118.00
IUUC-Sbi-113909	Sorghum bicolor	86.98	7.00e-90	322.00
IUUC-Tca-120961	Theobroma cacao	55.50	1.00e-58	218.00
IUUC-Tae-124441	Triticum aestivum	85.42	9.00e-99	351.00
IUUC-Tur-126641	Triticum urartu	78.04	5.00e-98	349.00
IUUC-Vvi-131562	Vitis vinifera	57.51	3.00e-56	210.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence