iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076413

Ensembl Protein ID

OB01G41760.1

UniProt Accession

J3L4M0; J3L4M0_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB01G41760	OB01G41760.1	OB01G41760.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-19	70.4	190	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ ++t+++f s+  +++s+s D+t++vW++++g++++
   Q: 190  GHSKDITDFDFsSNnQYIASCSMDKTMRVWEISKGTCIR 228
           8***********555********************9986 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDPDFLSWVL QPPTPSSSRP DADYAALRRL LLRRKPSSAL QHRMEWRCTG RGYVAYRNFL 60
LRRIDGGAAS SSAHSTPSNS GRWAPSPAHA ALSEADSWSS IRDWRSNSGP LTGNISISSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCCTCCAC GCCGGCCTGC CCGCCTGTCC CCTCCCGGCC GATGGACCCC GACTTCCTCA 60
GCTGGGTCCT GCAGCCCCCG ACCCCCTCCT CCTCCCGCCC CGACGCCGAC TACGCGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	77.03	2.00e-139	487.00
IUUC-Aml-001761	Ailuropoda melanoleuca	38.79	1.00e-54	206.00
IUUC-Atr-002577	Amborella trichopoda	67.03	2.00e-180	625.00
IUUC-Aca-004423	Anolis carolinensis	38.25	3.00e-53	201.00
IUUC-Aly-005453	Arabidopsis lyrata	62.61	1.00e-159	555.00
IUUC-Ath-007256	Arabidopsis thaliana	62.39	4.00e-158	550.00
IUUC-Ame-010600	Astyanax mexicanus	37.46	7.00e-50	190.00
IUUC-Bta-013511	Bos taurus	38.79	9.00e-55	206.00
IUUC-Bdi-014322	Brachypodium distachyon	88.38	0.00e+00	774.00
IUUC-Bol-015992	Brassica oleracea	62.91	7.00e-158	549.00
IUUC-Bra-017399	Brassica rapa	63.08	3.00e-156	543.00
IUUC-Cja-019508	Callithrix jacchus	39.09	7.00e-55	207.00
IUUC-Cfa-020273	Canis familiaris	39.39	1.00e-55	209.00
IUUC-Cpo-022002	Cavia porcellus	38.79	8.00e-55	207.00
IUUC-Cre-022575	Chlamydomonas reinhardtii	26.10	4.00e-15	75.10
IUUC-Csa-023862	Chlorocebus sabaeus	38.79	1.00e-54	206.00
IUUC-Cin-025687	Ciona intestinalis	38.32	4.00e-64	237.00
IUUC-Csv-025992	Ciona savignyi	38.92	2.00e-65	242.00
IUUC-Dre-028697	Danio rerio	38.48	3.00e-52	198.00
IUUC-Dno-029208	Dasypus novemcinctus	38.79	1.00e-54	206.00
IUUC-Dor-030316	Dipodomys ordii	39.05	4.00e-31	128.00
IUUC-Eca-033362	Equus caballus	35.71	7.00e-35	140.00
IUUC-Eeu-034599	Erinaceus europaeus	34.84	6.00e-38	150.00
IUUC-Fca-035874	Felis catus	38.79	1.00e-54	206.00
IUUC-Gmo-039176	Gadus morhua	37.88	5.00e-52	197.00
IUUC-Gac-041802	Gasterosteus aculeatus	39.16	6.00e-54	204.00
IUUC-Gma-043787	Glycine max	62.55	2.00e-158	551.00
IUUC-Ggo-045546	Gorilla gorilla	39.09	4.00e-55	207.00
IUUC-Hsa-046407	Homo sapiens	39.09	4.00e-55	207.00
IUUC-Hvu-047726	Hordeum vulgare	82.42	0.00e+00	721.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	38.79	9.00e-55	206.00
IUUC-Lpe-051374	Leersia perrieri	95.37	0.00e+00	842.00
IUUC-Loc-052403	Lepisosteus oculatus	35.56	4.00e-47	181.00
IUUC-Laf-053721	Loxodonta africana	38.79	1.00e-54	206.00
IUUC-Mcc-055449	Macaca mulatta	38.79	9.00e-55	207.00
IUUC-Meu-056487	Macropus eugenii	37.65	5.00e-52	197.00
IUUC-Mtr-058659	Medicago truncatula	58.94	4.00e-155	540.00
IUUC-Mmr-061406	Microcebus murinus	38.79	2.00e-54	205.00
IUUC-Mdo-062331	Monodelphis domestica	37.62	3.00e-47	182.00
IUUC-Mmu-064001	Mus musculus	38.79	2.00e-54	205.00
IUUC-Mac-064934	Musa acuminata	70.22	1.00e-180	625.00
IUUC-Mpu-065871	Mustela putorius furo	38.79	1.00e-54	206.00
IUUC-Mlu-067463	Myotis lucifugus	38.79	2.00e-53	202.00
IUUC-Nle-070136	Nomascus leucogenys	38.79	7.00e-55	207.00
IUUC-Opr-070913	Ochotona princeps	38.30	5.00e-52	197.00
IUUC-Ont-071347	Oreochromis niloticus	38.86	1.00e-53	202.00
IUUC-Oan-073527	Ornithorhynchus anatinus	34.63	2.00e-46	178.00
IUUC-Ocu-074829	Oryctolagus cuniculus	36.94	3.00e-48	185.00
IUUC-Oba-075666	Oryza barthii	93.41	0.00e+00	815.00
IUUC-Ogl-076998	Oryza glaberrima	94.30	0.00e+00	804.00
IUUC-Ogu-078287	Oryza glumaepatula	93.63	0.00e+00	816.00
IUUC-Oin-079359	Oryza indica	93.19	0.00e+00	815.00
IUUC-Olo-080438	Oryza longistaminata	96.05	1.00e-141	494.00
IUUC-Ome-081328	Oryza meridionalis	92.97	0.00e+00	827.00
IUUC-Oni-082574	Oryza nivara	93.41	0.00e+00	815.00
IUUC-Opu-083376	Oryza punctata	89.60	0.00e+00	739.00
IUUC-Oru-085162	Oryza rufipogon	92.54	0.00e+00	786.00
IUUC-Osa-085507	Oryza sativa	92.54	0.00e+00	786.00
IUUC-Ola-087387	Oryzias latipes	37.88	7.00e-51	193.00
IUUC-Oga-088694	Otolemur garnettii	38.79	1.00e-54	206.00
IUUC-Oar-090355	Ovis aries	38.79	1.00e-54	206.00
IUUC-Ptr-091488	Pan troglodytes	37.85	4.00e-30	124.00
IUUC-Pan-092516	Papio anubis	38.79	1.00e-54	206.00
IUUC-Pma-094572	Petromyzon marinus	37.24	1.00e-55	209.00
IUUC-Ppa-096003	Physcomitrella patens	53.33	1.00e-112	398.00
IUUC-Pfo-096819	Poecilia formosa	38.35	3.00e-50	191.00
IUUC-Pab-098373	Pongo abelii	38.72	1.00e-54	206.00
IUUC-Pop-099930	Populus trichocarpa	66.81	2.00e-172	597.00
IUUC-Pca-100248	Procavia capensis	38.48	2.00e-52	199.00
IUUC-Ppe-101592	Prunus persica	65.58	3.00e-164	570.00
IUUC-Pva-102971	Pteropus vampyrus	38.79	1.00e-54	206.00
IUUC-Rno-105386	Rattus norvegicus	39.14	8.00e-54	203.00
IUUC-Sha-107418	Sarcophilus harrisii	37.65	5.00e-52	197.00
IUUC-Smo-108859	Selaginella moellendorffii	52.09	3.00e-121	427.00
IUUC-Sit-109987	Setaria italica	89.25	0.00e+00	801.00
IUUC-Sly-111433	Solanum lycopersicum	74.84	1.00e-143	501.00
IUUC-Stu-112677	Solanum tuberosum	66.02	8.00e-171	592.00
IUUC-Sar-113317	Sorex araneus	51.95	1.00e-19	90.10
IUUC-Sbi-114115	Sorghum bicolor	87.12	6.00e-145	505.00
IUUC-Tru-118749	Takifugu rubripes	38.25	5.00e-52	197.00
IUUC-Tni-119685	Tetraodon nigroviridis	38.67	3.00e-52	198.00
IUUC-Tca-121769	Theobroma cacao	64.01	1.00e-161	561.00
IUUC-Tae-125563	Triticum aestivum	82.42	6.00e-124	435.00
IUUC-Tur-126403	Triticum urartu	77.91	2.00e-137	481.00
IUUC-Tbe-127245	Tupaia belangeri	38.78	2.00e-37	149.00
IUUC-Ttr-128854	Tursiops truncatus	39.09	1.00e-56	213.00
IUUC-Vvi-131113	Vitis vinifera	67.54	6.00e-170	589.00
IUUC-Xtr-132420	Xenopus tropicalis	36.31	5.00e-51	194.00
IUUC-Xma-134302	Xiphophorus maculatus	38.07	3.00e-53	201.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence