iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058292

Ensembl Protein ID

AES89375

UniProt Accession

G7JMD2; G7JMD2_MEDTR

Genbank Protein ID

AES89375.1

Protein Name

Nucleosome/chromatin assembly factor group protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g073080

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g073080	AES89375	AES89375

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-30	103.6	209	245

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           gH++ v ++++   +++l+ sG+dD+++ +WDlrt++
   Q: 209  GHESVVEDVSWhfhNENLFGSGGDDCKLIIWDLRTNK 245
           8************555******************986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAEEYEPENE AEVEEEFSVW KRNTPLLYDL FISHPLAWPS LTVQWLPSPP QPHSNSSFNL 60
HKLLLATHTS DEEPNYLMLA ESTLPGNPSQ PIIATDPENP ILPKVEITQR ILVDGEVNRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGCATTGG CGCGAATAGG GTATAGAATT CTTGAGAAAA ACAAAAATGG CGGAAGAATA 60
CGAACCCGAA AACGAAGCAG AGGTTGAAGA AGAATTCTCC GTTTGGAAGA GAAACACTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

mtr:MTR_4g073080

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005978	Arabidopsis lyrata	63.05	8.00e-150	522.00
IUUC-Ath-007097	Arabidopsis thaliana	63.61	2.00e-149	521.00
IUUC-Bol-015255	Brassica oleracea	63.75	3.00e-148	517.00
IUUC-Bra-016771	Brassica rapa	63.87	4.00e-147	513.00
IUUC-Gma-043256	Glycine max	80.88	1.00e-176	612.00
IUUC-Kpa-049258	Komagataella pastoris	33.42	2.00e-65	241.00
IUUC-Oba-075939	Oryza barthii	56.60	6.00e-108	383.00
IUUC-Opu-083343	Oryza punctata	57.26	8.00e-109	386.00
IUUC-Pop-099884	Populus trichocarpa	67.78	9.00e-157	545.00
IUUC-Ppe-101659	Prunus persica	69.01	1.00e-145	508.00
IUUC-Sly-111542	Solanum lycopersicum	67.88	3.00e-153	533.00
IUUC-Stu-112318	Solanum tuberosum	67.71	8.00e-151	525.00
IUUC-Tca-121803	Theobroma cacao	66.75	5.00e-156	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence