iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100078

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_199763; POPTR_0009s16740g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s16740	POPTR_0009s16740.1	POPTR_0009s16740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-32	111.4	270	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+eflCpI+le+M dPv++++G+ty+r+sI+kwl+s+++tcP+t+q+l + +l  n +lr+liq+wce+n+
   Q: 270  IPHEFLCPITLEIMVDPVIVATGQTYERESIQKWLNSNHRTCPKTGQTLGHLSLASNFALRNLIQEWCEKNN 341
           79*******************************************************************996 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MERQRVVERG EKAGVSSSSN GGGEVDVVVE MMDVIEAVGL YVGYRRTQRK ECLNLARRLK 60
LLLPLLEEIK EIGNYKLVSS EGLKTSLDNL KKALLGAKKL LKKCSCGSKI YLAMESEAVM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGGC AGAGAGTGGT GGAAAGAGGA GAGAAGGCAG GCGTGTCGAG TTCATCCAAT 60
GGTGGAGGTG AAGTTGATGT TGTGGTGGAA ATGATGGATG TGATTGAGGC CGTTGGATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0009s16740g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csv-026196	Ciona savignyi	25.31	3.00e-10	60.80
IUUC-Loc-051960	Lepisosteus oculatus	25.58	8.00e-11	61.20
IUUC-Tca-121039	Theobroma cacao	80.00	0.00e+00	921.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence