iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2109__AT3G18930.1	fgenesh2_kg.3__2109__AT3G18930.1	fgenesh2_kg.3__2109__AT3G18930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-07	31.3	156	198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f++g  +++lp C H+fh++C+  w       + + +CPlCr
   Q: 156  CAVCLLEFEEGdyVRTLPlCFHAFHLECIDEW------LRSHPNCPLCR 198
           ********66666999****************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MRFVAPPPRS GDISPSPSPS SGLTEEILSR SSDPPLEFSP PLIAMVVILA AAFLFVTYSR 60
LISRRFLSPL FRRFRRWRCR RRRLLHLSSA SSASTSSSDL RSFSPFPFDS FHYSSYSPYG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTAATTTT ATTTTTCCCA ATACCGTTTA CCTTTAGTCA ACGTTTTTTT TTTTCCACCA 60
AAGTCCCCAA ATACACATTT ACGTTTAAAG TTTAAACCTT TCACTGGAAC CTCTGTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_479408

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	46.75	2.00e-48	185.00
IUUC-Ath-006761	Arabidopsis thaliana	95.41	9.00e-157	545.00
IUUC-Bdi-014398	Brachypodium distachyon	37.30	1.00e-21	97.10
IUUC-Bol-015520	Brassica oleracea	79.67	4.00e-114	404.00
IUUC-Bra-017477	Brassica rapa	79.34	3.00e-114	404.00
IUUC-Gma-043732	Glycine max	50.00	8.00e-64	236.00
IUUC-Lpe-051662	Leersia perrieri	50.60	6.00e-19	87.80
IUUC-Mtr-058344	Medicago truncatula	48.10	2.00e-66	245.00
IUUC-Mac-065095	Musa acuminata	59.49	3.00e-24	105.00
IUUC-Ogu-077985	Oryza glumaepatula	51.09	3.00e-19	88.60
IUUC-Oin-079093	Oryza indica	51.09	9.00e-17	80.90
IUUC-Opu-083940	Oryza punctata	51.09	4.00e-17	81.60
IUUC-Oru-084986	Oryza rufipogon	39.13	1.00e-09	57.00
IUUC-Pop-099495	Populus trichocarpa	47.41	2.00e-62	232.00
IUUC-Ppe-101726	Prunus persica	50.72	2.00e-69	255.00
IUUC-Sit-109801	Setaria italica	33.92	3.00e-17	82.00
IUUC-Sly-111253	Solanum lycopersicum	51.52	2.00e-55	208.00
IUUC-Stu-112012	Solanum tuberosum	51.38	9.00e-55	206.00
IUUC-Sbi-114003	Sorghum bicolor	30.66	1.00e-19	90.10
IUUC-Tca-120931	Theobroma cacao	53.20	1.00e-80	292.00
IUUC-Tae-123946	Triticum aestivum	39.56	7.00e-21	94.00
IUUC-Vvi-131492	Vitis vinifera	49.87	6.00e-69	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence